Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01593 ATGGTTGCTGAGAACTACCCTTCTCCCACATACTTCATCCTCCTGTTCATAACCATAACACGTTTGATCTCCACAGTGGGCAAAACCTCCCAATGGACGAAGGCCCTGTCGCTGACTCCGGAACTCGCCTCCGTCTCCCTCGACGACACCATCTTCTGCAAGCTCCGTGACGACCCAGAGGCCCTCCAGGGGAGGGCCTCCAGGGACTACGGGAACCTCGTCCGCGAGGTTCCCTTGGCAGTCTTCCACCCAGCCTCAGCGAGCGACATCGCGAGGCTGATCAAGCTGTCGTACAACGGCTCTGTCCCCTTCAAGATTGCGGCGAGGGGGCAAGGGCACTCGACAAGGGGCCAGGCGATGGCACGTGAGGGGGTGGTGGTGGACATGGCGGGGTTCAGAGAGAGAGGGAATGGAGTGGGGATAAGGGTTGTGAGTAGTGTGGACCCTAATAATAAGAATGGTTACTACTATTATGCGGATGTTGGAGGGGAACAGTTGTGGATCGATGTGCTACACGCCACGCTCGAGCATGGACTTGCACCTATGTCCTGGACTGATTACTTGTACTTGACGCTGGGAGGGACTCTCTCCAATGCTGGCATCAGTGGCCAGACATTCCGCTATGGTCCTCAAATCACCACTGTCCGGGAAATGGACGTAATCACCGgaaAGGGAGAATTTGTGACTTGCTCTCAGCAGACGAATTCGGAGTTGTTTCACGCGGTTCTTGGAGGCTTAGGACAATTTGGAATTATAACAAGGGCAAGAATTGCTCTTGCGCCAGCTCCGAAGAGGGTTAAATGGGTGAGACTTTTGTACAATGACTTTTCTGCTTTTACCAAAGACCAGGAACAACTAATATCTGTCACTGGAAGGAAACAAAATGTTTCACTGGATTATTTGGAAGGATTGCTGCTAATGCACCAAGGACCCATAAATAATTGGAGATCTTCTTTCTTCCCTTTAGCCGACCATGCCCGAATAATTTCGCTAGTAACTAAACACAGCGTCCTCTATTGCCTAGAAGTTGCCAAATATTATGATGGCCAAAATGAAAACAATGTGGACAAGGAACTCCAAGTTTTACTACAAGGATTGAGCTATATCCCTGGATTTTACTATGAAAAAGATGTCTCATATTTTGAGTTCTTGAATAGAGTCCGAAGTGGAGAGTTGAAGCTACAGTCACAAGGACTATGGGATGTTCCTCACCCGTGGCTTAATTTGTTTATACCGAAATCTCAAATCATGGAATTTGACTCGGGCGTGTTCAAGAATATCATCCTTAAACGAAACATCACCACAGGACCTGTCTTGGTTTACCCCATGAATAGAAACAAgtgggacaataggatgtcagcatcaatacccgacgaggatatcttctacacagttggatttttgcattcaaGGAAGATATCAGAGGTGGATAATAATCGCTGGCCAAATTCTTTCATTGTACACAAGGAGGCAAATATTGGGAAATCTTCATCATTTATGGAGGACGAGAATAAAGCCATAATAACAGGAGAGGAATTGGAAAAAGTTTCAGAATTTGAAATTCACATGGGAAAAGGAAAAACTAATGTACACCAATATAGAGAATTGTCAGGCAACAATCGATAA 1626 0.4471 MVAENYPSPTYFILLFITITRLISTVGKTSQWTKALSLTPELASVSLDDTIFCKLRDDPEALQGRASRDYGNLVREVPLAVFHPASASDIARLIKLSYNGSVPFKIAARGQGHSTRGQAMAREGVVVDMAGFRERGNGVGIRVVSSVDPNNKNGYYYYADVGGEQLWIDVLHATLEHGLAPMSWTDYLYLTLGGTLSNAGISGQTFRYGPQITTVREMDVITGKGEFVTCSQQTNSELFHAVLGGLGQFGIITRARIALAPAPKRVKWVRLLYNDFSAFTKDQEQLISVTGRKQNVSLDYLEGLLLMHQGPINNWRSSFFPLADHARIISLVTKHSVLYCLEVAKYYDGQNENNVDKELQVLLQGLSYIPGFYYEKDVSYFEFLNRVRSGELKLQSQGLWDVPHPWLNLFIPKSQIMEFDSGVFKNIILKRNITTGPVLVYPMNRNKWDNRMSASIPDEDIFYTVGFLHSRKISEVDNNRWPNSFIVHKEANIGKSSSFMEDENKAIITGEELEKVSEFEIHMGKGKTNVHQYRELSGNNR 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01593 541 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 263 475 IPR015345 GO:0009690|GO:0019139|GO:0050660
Gma15g01593 541 SUPERFAMILY FAD-linked oxidases, C-terminal domain 263 476 IPR016164 GO:0003824|GO:0050660
Gma15g01593 541 Pfam FAD binding domain 78 231 IPR006094 GO:0050660
Gma15g01593 541 PANTHER CYTOKININ DEHYDROGENASE 3 19 493 - -
Gma15g01593 541 Gene3D - 64 128 IPR016167 -
Gma15g01593 541 SUPERFAMILY FAD-binding/transporter-associated domain-like 65 261 IPR036318 GO:0050660
Gma15g01593 541 PANTHER GULONOLACTONE OXIDASE 19 493 - -
Gma15g01593 541 Gene3D - 265 472 IPR016170 -
Gma15g01593 541 ProSiteProfiles PCMH-type FAD-binding domain profile. 74 262 IPR016166 GO:0071949
Gma15g01593 541 ProSitePatterns Oxygen oxidoreductases covalent FAD-binding site. 78 113 IPR006093 GO:0016491
Gma15g01593 541 Gene3D - 129 264 IPR016169 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01593 Gma-Chr15 15596260 15604052 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01593 K00279 - gmx:100804431 922.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01593 15 15596260 15604052 Gma15g01593 15 15596260 15604052 ECH
Gma15g01593 15 15596260 15604052 Gma09g00580 09 6299053 6303527 GST
Gma17g00514 17 4229266 4235693 Gma15g01593 15 15596260 15604052 PCT
Gma13g00846 13 22732326 22736340 Gma15g01593 15 15596260 15604052 PCT
Gma15g01593 15 15596260 15604052 Gma17g00514 17 4229266 4235693 PCT
Gma15g01593 15 15596260 15604052 Gma13g00846 13 22732326 22736340 PCT