Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01555 ATGCGCTCAGGAGCTTGTACATTGCAACAGACCCTCACAGCGGAGGCTGCTTCAGTGTTGAAGCACTCTCTCGGGTTGGCACGCAGAAGGGGCCATGCACAGGTCACCCCTCTGCATGTTGCTGCAACTTTGCTCAGCCTAAGAGCCAGCTCCTTAAGAAGGGCTTGTCTCAAGTCTCAGCCACAAACACATTCTCATTCTCATTCACACCCTCTTCAGTGCAGAGCCCTTGAGCTTTGCTTCAATGTTGCCCTCAACAGGCTCCCAACCACACCTGCTGCTGCTGCTGCAGGccctttgctccacacacagcacccctctctctccaatgctctcattgctgctctcaagagagcacaggcacaccagagaagaggctgcattgagcagcagcagcagcagcctcttctcaccatcaaggttgagcttgaacagctcattatatctatccttgatgaccctagtgttagtagggttatgagggaagctggtttttcaagcactgctgtgaagagcaacattgagGACACTTCTAATTCAGCACCTTCTGTTTTCTACAACAGTTCTGGTGGTGGTGTTTTCTCTTCTCCTTGCTCACCTTCCCCCAGTGAGAACAACAACACTGCTAGTGTTTTCAGGCAAAACCATTTCCTTGCTGCCTACACTTCTAATGAATTTAGTACTTCTCCTTCTCCACCACTTTTGTTCAAGAAGGCTTCAGTGTTTCCCATCACTGAGTCACCACCACCTTCTTCTTCTTCCAAAGACGATATCAAGGTGGTGCTTGATGTCCTCTTGAGGAAGAAGAAGAGGAACGCTGTGATAGTTGGTGACTCAGTGGCACTCACTGAGGGTCTTGTGGGGGAGCTTATGGGGAAGCTGGAGAGAGGAGAGGTCCCTGATGAGTTGAAGTCTACACATTTCATCAAGTTTCAGCTTGCACCGGTTTCTTTGAGGTTCATGAAGAGGGATGAAGTGGAGATGAGCCTCTCAGCACTGAAGAGGAAGGTGGATTCTGTTGCATCAAGTGGAGGTGGAGCCATTTTCTATGTTGGAGACCTGAAGTGGACAGTGGAAGGAACAAGTGAAACAGAGGAAGGTGGTGGTGTTTGTGGCTATTATAACCCTGTTGTTGATCATCTTGTTGCTGAAGTAGGGAAGTTGTTTTGTGACTCCAACACTACTAAGGTGTGGCTTTTGGCCACAGCAAGTTATCAAACATACATGAGGTGCCAAATGAGGCAACCCCCTCTTGAGACTCAGTGGTCTCTTCAAGCTGTTCCTGTTCCATCAGGTGGACTTGGCTTGAGCCTCCATGCTTCCAGTGTTCATGATTCAAAGGTGACAATCTCCCAGAATCCATCTCATATGATGGAAACAAAGTTCTTCAGTAACAACAAGGAGGAGCAGGATAAACTCAACTGTTGTGAAGAATGTGCCTCCAATTATGAAAAAGAAGCTCAATTGTTCAAACCAGGACAGAAGAAACTGTTACCATCCTGGCTTCAGTCTCATACCACCGAAGCCCATCTAAAGGATGAGTTAACTCAGCTGAAAAGGAAATGGAACAGACTGTGCCACTGTCTGCACCAGAGCAAGCAGCCTCAGAACCAATGGAGCAACACTTTACATGGAAATTATCACAGTTCAAATGGCAAGATCTACCCTTACAATTCATCATACCCCTGTTGGCCAAACCAAGGCAGTGTCTTCACAGATTCAAGCTCCATATCTTTTGCTGATTCACCTGCTGCGAAACCTGCTTATAGCTCCAACAACATAGTCCCTCGGTTCAGGCGCCAGCAATCATGCTCCATTGAGTTCAATTTCAGTGATGTGACTCAGAAAAAGCCATCATCCACAGCCTTGGATTCTCTCAAGGGCATGGAAGGTAATAATAGTGAAGTAAAGATTACTCTTGCTCTTGGAAATTCAACATTCGGTGGTTCGGGGCAAACGGTCGAAAATATCATAACTACTACTGATAGAACACTGCGAAGAGCTCATATTTGTAAACTGTTGCAGGAGAATGTGCCATGGCAATCTGAGACAGTTCCTTCCATAGCTGAGGCATTGGTTGATTCCAAATCTGCAAAGCCAAGTGCCACTACTTGGCTTTTGTTGCAAGGAACTGACTCTATTGGGAAAACAAGGTTGGCACGTGCCATTGCAGAATCAGTGTTTGGCTCAGTTGATTTTCTCCTTCACTTGGACATGCTGAAAAACAACAAGGAGAATTCAGCAACCCCATTTTGTGAAATGGTAGCTGGAGCACTGAAGAGCCATGAGAAGCTTGTGATTCTGATAGAAAGTTTGGATTTTGCAGATGCCCAATTCAGGAAGTTCCTTGCAGATGGGTTTGAAACTGCAAAGTTTGGAAATTTAAGCATGACTGAGGAGAGTTCAGGCCAAGCAATATTCATACTGACCAATGGTGACACTAGGAGCAATGAAGAGAAGAAAACCAACGACTCGGTGATGAAGTTGGTGCTGCAGATAAGTGAAACCAAGCCTACTTTGGAGTCTTCTCCACATTGTTTGGGCCAGAAGAGAAGGGCTGAAATACTTGATTTGTTTACCAAGGTTAAGAATCCAAGGGTTGAGGAGAAGGAAGAGGGTAGAAAAGTCTTTTTAAGGCATTCAAGCTTCAACCATCTTGACCTGAACATGAAAGCTGATGAAGAAGAGGATGATGATGAAGGGGAAGAGAAAACAGGTGGAAGTAGTCCAATATCAAGTGATTTGACAAGGGAAACAGTGGTTGATCCATTGAGCTGGAATGGTGCACTTGAGTCAATTGAGAACCGGTTTGAGTTGAATGAAGGTCCAGAGAGGGAGAGGGAGGTGGCAGATATGTTTCTGTCAAGGATAAAAGAGTCTTTTGAGGAGGTATATGATGATGATGATGGGGTGGTGGTGAATTTTACTGTAGAGGAGAGGGTGATAGAGGAAATTGGTGTGGGGTGTGGTAATTTTACTAACAGCATGTTTGAGAAATGGCTGAAAGACATTTTTCAAAGCAGTTTATTACAGACAGTTAACTTTGGTGATAAGGGGAAGGAAGGGGGTATAGGTTTTACACTTTGTTGGGGTGGTAAAGGAGATAGGAAATCGGATAGTGATGGGTTCATGGGTTCATGTTTGCCCAAGAATGTCCAAGTTAACTACTTCATGGATTGA 3180 0.4182 MRSGACTLQQTLTAEAASVLKHSLGLARRRGHAQVTPLHVAATLLSLRASSLRRACLKSQPQTHSHSHSHPLQCRALELCFNVALNRLPTTPAAAAAGPLLHTQHPSLSNALIAALKRAQAHQRRGCIEQQQQQPLLTIKVELEQLIISILDDPSVSRVMREAGFSSTAVKSNIEDTSNSAPSVFYNSSGGGVFSSPCSPSPSENNNTASVFRQNHFLAAYTSNEFSTSPSPPLLFKKASVFPITESPPPSSSSKDDIKVVLDVLLRKKKRNAVIVGDSVALTEGLVGELMGKLERGEVPDELKSTHFIKFQLAPVSLRFMKRDEVEMSLSALKRKVDSVASSGGGAIFYVGDLKWTVEGTSETEEGGGVCGYYNPVVDHLVAEVGKLFCDSNTTKVWLLATASYQTYMRCQMRQPPLETQWSLQAVPVPSGGLGLSLHASSVHDSKVTISQNPSHMMETKFFSNNKEEQDKLNCCEECASNYEKEAQLFKPGQKKLLPSWLQSHTTEAHLKDELTQLKRKWNRLCHCLHQSKQPQNQWSNTLHGNYHSSNGKIYPYNSSYPCWPNQGSVFTDSSSISFADSPAAKPAYSSNNIVPRFRRQQSCSIEFNFSDVTQKKPSSTALDSLKGMEGNNSEVKITLALGNSTFGGSGQTVENIITTTDRTLRRAHICKLLQENVPWQSETVPSIAEALVDSKSAKPSATTWLLLQGTDSIGKTRLARAIAESVFGSVDFLLHLDMLKNNKENSATPFCEMVAGALKSHEKLVILIESLDFADAQFRKFLADGFETAKFGNLSMTEESSGQAIFILTNGDTRSNEEKKTNDSVMKLVLQISETKPTLESSPHCLGQKRRAEILDLFTKVKNPRVEEKEEGRKVFLRHSSFNHLDLNMKADEEEDDDEGEEKTGGSSPISSDLTRETVVDPLSWNGALESIENRFELNEGPEREREVADMFLSRIKESFEEVYDDDDGVVVNFTVEERVIEEIGVGCGNFTNSMFEKWLKDIFQSSLLQTVNFGDKGKEGGIGFTLCWGGKGDRKSDSDGFMGSCLPKNVQVNYFMD 1059
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01555 1059 Gene3D - 9 180 IPR036628 -
Gma15g01555 1059 ProSiteProfiles Clp repeat (R) domain profile. 8 180 IPR004176 -
Gma15g01555 1059 SUPERFAMILY Double Clp-N motif 12 175 IPR036628 -
Gma15g01555 1059 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 673 811 IPR027417 -
Gma15g01555 1059 Coils Coil 466 486 - -
Gma15g01555 1059 PANTHER PROTEIN SMAX1-LIKE 5 1 1034 - -
Gma15g01555 1059 Gene3D - 650 860 IPR027417 -
Gma15g01555 1059 Pfam Clp amino terminal domain, pathogenicity island component 141 176 IPR004176 -
Gma15g01555 1059 Pfam Clp amino terminal domain, pathogenicity island component 26 46 IPR004176 -
Gma15g01555 1059 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 1034 - -
Gma15g01555 1059 MobiDBLite consensus disorder prediction 888 917 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01555 Gma-Chr15 14834194 14838562 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01555 - - gmx:102660146 1984.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01555 15 14834194 14838562 Gma15g01555 15 14834194 14838562 ECH
Gma15g01555 15 14834194 14838562 Gma09g00549 09 5789871 5794187 GST
Gma17g00550 17 4524644 4528424 Gma15g01555 15 14834194 14838562 PCT
Gma13g00815 13 22443976 22447798 Gma15g01555 15 14834194 14838562 PCT
Gma15g01555 15 14834194 14838562 Gma17g00550 17 4524644 4528424 PCT
Gma15g01555 15 14834194 14838562 Gma13g00815 13 22443976 22447798 PCT