Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00549 ATGCGCTCAGGAGCTTGTACATTGCAACAGACCCTCACAGCAGAGGCTGCTTCAGTGTTGAAGCACTCTCTCGGGTTGGCACGCAGAAGGGGCCATGCACAGGTCACCCCTCTGCATGTTGCTGCAACTTTGCTCACCCTAAGAGCCAGTTCCTTAAGAAGGGCTTGTCTCAAGTCTCAACCACAAACACAAACACATTCACACCACCCTCTTCAGTGCAGAGCCCTTGAGCTTTGCTTCAATGTTGCCCTCAACAGGCTCCCTACAACTCCTGGCCCTTTGCTCCACACACAACCCTCTCTCTCCAATGCTCTCATTGCTGCTCTCAAGAGAGCACAGGCTCACCAGAGAAGGGGGTGCATTGAGCAACAACAGCAACAACAGCAACCACCTCTTCTCACCATCAAGGTTGAGCTTGAACAGCTCATCATTTCTATCCTTGATGACCCTAGTGTTAGTAGGGTTATGAGAGAAGCTGGTTTTTCAAGCACTGTTGTTAAGAGTAATATTGAAGACACTTCTTCTTCAGCACCTTCTGTTTTCTACAACAGTTCTGGTGGTGGTGTTTTCTCTTCTCCTGGCTCACCTTCTCCCAGTGAGAAGAATAATGTTTTCAGGCAGAACCATTTCTTAGCTGCTTACACTTCTAATGAGTTTAGTAGTACTTCTCCTAATTCTTCACTTTTGTTGAAGAAGGCTTCAGTGTTTCCCATCATTGAGTCACCACCACCCTCTTCATCTAAGGAGGATATCAAGGTTGTTTTTGATGTTCTCTTGAGGAAGAAGAAGAGGAACACTGTGATAGTTGGTGATTCATTGGCACTCACTGAAGGTCTTGTGGGGGAGCTTATGGGGAAATTGGAGAGAGGAGAGGTTCCTGATGAGTTGAAGTCAACACATTTCATCAAGTTTCAGCTTGCATCACCGGTTTCTTTGAGGTTCATGAAAAGGGATGAAGTGGAGATGAGTCTTTCTGCACTGAAGAGGAAGGTGGATTCTGTTGTTGTATCAGGTGGAGGAGGAGCCATTTTCTATGTTGGAGACTTGAAGTGGACAGTGGAATTAGGAACAAGTGAAAAAGAGGAAGGTGGTGATGTTTGTGGCTATAATTATTATTATAACCCTGTTGATCATCTCGTTGCTGAGATAGGGAAGTTGTTTTGTGACTCCAATAACACTACTAAGGTGTGGCTTTTGGCCACAGCAAGTTATCAAACATACATGAGGTGCCAAATGAGGCAACCCCCTCTTGAGACTCAGTGGTCTCTTCAAGCTGTTCCTGTTCCATCAGGTGGACTTGGCTTGAGTCTTCATGCTTCAAGTGTTCATGATTCAAAGATGACAATCTCCCAGAATCCATCCAATATGATGGAAACAAAGCTCTTCAGTAGCAAAAAGGAGGAACAGGATAAACTCAACTGTTGTGAAGAATGTGCCTCCAGTTATGAAAAAGAAGCTCAGTTGTTCAAACCAGGCCAGAAGAAACTGTTACCATCCTGGCTTCAGTCTCATACCACCGAAGCCCATCAAAAGGATGAGTTAGCTCAGCTGAAAAGGAAATGGAACAGACTATGCCACTGTCTGCACCAGAGCAAGCAGCCTCAGAACCATTGGAGCAACACTTTACATGGCAATTATCACAGTTCAAATGGCAACAAGATCTACCATTACAATTCATCATATCCCTGGTGGCCAAACCAAGGCACTAGTGTCTTCACAGATTCAAGCTCCATATCTTTTGCTGATTCACCTCCAAAACCAGCTTATAGCTCCAACAACAACATTGTGCCTCGGTTCAGGCGCCAGCAATCATGCACCATTGAGTTCAATTTCAGTGATGTCACTCAGAAAAAGCCATCCACAACAGCCTTGGATTCTCTCAAGGGCATGGAAGGTAATAATAGTAGTGAAGTAAAGATTACTCTTGCTCTTGGAAATTCAACATTCGGTGGTGGTTCGGGGCAAACGGTGGAAAATATCATAACTACTACTGATAGAACACTGCGACGAGCTCATATTTGTAAACTGTTGCAGGAGAATGTTCCATGGCAATCTGAGACAATTCCTTCCATAGCTGAGGCATTGGTTGATTCCAAATCAGCAAAGCAAAGTTCCACTACTTGGCTTTTATTACAAGGAACTGACTCTATTGGAAAAACAAGGTTGGCACGTGCCATTGCAGAATCAGTGTTTGGCTCAGTTGATTTTCTCCTTCACTTGGACATGCTGAAAAACAACAACAAAGAGAATTCAGCTGATATAGTGGCTGGAGCATTGAAAAGCCATGAAAAGGTTGTGGTTCTGATAGAAAGTTTGGATTTTGCAGATGCCCAGTTCAGGAAGTTTCTTGCAGATGGGTTTGAAACTGCAAAGTTTGGAAATTTAAGCATGAATGAGAAGAGTTCAGGCCAAGCAATATTCATATTGACCAATGGTGACACTAGGAGCAATGAAGAGAAGAAAACCAATGACTCAGTGATGAAGTTGGTGTTGCAGATAAGTGAAACCAAACCTAGTTTGGAGTCTTCATCACCTAGTTTGGGTCAGAAGAGAAGGGCTGAAGTACTGGATTTGTTTACCAATGTCAAGAGTCCAAGGGTTGAGGAGAAAGAGGAGGGTAAGAAAGTCTTTTCAAGGCATTCAAGCTTCAACAACCTTGACCTGAACATGAAAGCTGATGAAGAAGAGGATGATGATGGAAGTAGTCCAATATCAAGTGATTTGACAAGGGAAACAGTGGTTGATCAACTTGAGTTAATTGAGAACCGGTTTGAGTTTAATGAAGGTCCAGAGAGGGAGAGGGAGAGGGAGGTGACACAAATGTTTCTGTCAAGGATAAAAGAGTCTTTTGAGGAGGTATATGATGATGATAATGGTGATGGGGTGGTGGTGAATTTTACTGTAGAGGAGAGGGTGATAGAGGAAATTGGTGTGGGGTTTGGTAATTTTACTAACAGCATGTTTGAGAAATGGCTGAAAGACATTTTTCAAAGCAGTTTATTACAGACAGTTGTTAACTTTGGTGATGGGGGGAAGGAGAGGGGTATAGGTTTTACACTTTGTTGGGGTGGTAAAGGAGATAGGAAATCGGATAGTGATGGGTTCATGGGTTCATGTTTGCCCAAGAATGTCCAAGTTAACTACTTCATGGATTGA 3156 0.435 MRSGACTLQQTLTAEAASVLKHSLGLARRRGHAQVTPLHVAATLLTLRASSLRRACLKSQPQTQTHSHHPLQCRALELCFNVALNRLPTTPGPLLHTQPSLSNALIAALKRAQAHQRRGCIEQQQQQQQPPLLTIKVELEQLIISILDDPSVSRVMREAGFSSTVVKSNIEDTSSSAPSVFYNSSGGGVFSSPGSPSPSEKNNVFRQNHFLAAYTSNEFSSTSPNSSLLLKKASVFPIIESPPPSSSKEDIKVVFDVLLRKKKRNTVIVGDSLALTEGLVGELMGKLERGEVPDELKSTHFIKFQLASPVSLRFMKRDEVEMSLSALKRKVDSVVVSGGGGAIFYVGDLKWTVELGTSEKEEGGDVCGYNYYYNPVDHLVAEIGKLFCDSNNTTKVWLLATASYQTYMRCQMRQPPLETQWSLQAVPVPSGGLGLSLHASSVHDSKMTISQNPSNMMETKLFSSKKEEQDKLNCCEECASSYEKEAQLFKPGQKKLLPSWLQSHTTEAHQKDELAQLKRKWNRLCHCLHQSKQPQNHWSNTLHGNYHSSNGNKIYHYNSSYPWWPNQGTSVFTDSSSISFADSPPKPAYSSNNNIVPRFRRQQSCTIEFNFSDVTQKKPSTTALDSLKGMEGNNSSEVKITLALGNSTFGGGSGQTVENIITTTDRTLRRAHICKLLQENVPWQSETIPSIAEALVDSKSAKQSSTTWLLLQGTDSIGKTRLARAIAESVFGSVDFLLHLDMLKNNNKENSADIVAGALKSHEKVVVLIESLDFADAQFRKFLADGFETAKFGNLSMNEKSSGQAIFILTNGDTRSNEEKKTNDSVMKLVLQISETKPSLESSSPSLGQKRRAEVLDLFTNVKSPRVEEKEEGKKVFSRHSSFNNLDLNMKADEEEDDDGSSPISSDLTRETVVDQLELIENRFEFNEGPEREREREVTQMFLSRIKESFEEVYDDDNGDGVVVNFTVEERVIEEIGVGFGNFTNSMFEKWLKDIFQSSLLQTVVNFGDGGKERGIGFTLCWGGKGDRKSDSDGFMGSCLPKNVQVNYFMD 1051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00549 1051 MobiDBLite consensus disorder prediction 889 908 - -
Gma09g00549 1051 ProSiteProfiles Clp repeat (R) domain profile. 8 176 IPR004176 -
Gma09g00549 1051 Gene3D - 653 862 IPR027417 -
Gma09g00549 1051 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 676 810 IPR027417 -
Gma09g00549 1051 SUPERFAMILY Double Clp-N motif 12 117 IPR036628 -
Gma09g00549 1051 Gene3D - 9 176 IPR036628 -
Gma09g00549 1051 PANTHER PROTEIN SMAX1-LIKE 5 1 1025 - -
Gma09g00549 1051 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 1025 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00549 Gma-Chr9 5789871 5794187 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00549 - - gmx:100785754 2000.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g00549 09 5789871 5794187 Gma09g00549 09 5789871 5794187 ECH
Gma15g01555 15 14834194 14838562 Gma09g00549 09 5789871 5794187 GST
Gma17g00550 17 4524644 4528424 Gma09g00549 09 5789871 5794187 PCT
Gma13g00815 13 22443976 22447798 Gma09g00549 09 5789871 5794187 PCT
Gma09g00549 09 5789871 5794187 Gma17g00550 17 4524644 4528424 PCT
Gma09g00549 09 5789871 5794187 Gma13g00815 13 22443976 22447798 PCT