Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01526 ATGGCAACTGAGAGTCCAATTAGAATCTCAGAAGCTGGTGGTAAATGGCCGTCTCATAAGGAAGCTGCAGCTTTTGGTTCACTGTCTCGTAACATGGCAACAGAGGATTTGGGTATACTTCTGAAGGGCCATAGGTACCAGGGTGGTGGAAAGGATGTGGCACCCAATCGCAGTGGCAGTGCACCTCCCAGCATTGAAGGCTCATTTCTGGCCATAGAAAACCTTTTACCCCAGCATAACACCACCCAGAATGCAAGCTTTGCCAACCTAAGCAGCGCTATGCAAAATTGTGAGTCTGAAGAACAATTGCGAGCTGATCCAGCTTATTTGGCATATTACAATTCCAATGTCAACCTAAACCCTAGACTTCCTCCCCCGCTTACATCCTGGGAAAATCGCCATCTAGGACGTCATATTATCAGTTTTAGAAATAATTGGAGAATGTCTACTACGGATGATAGTGGTAAAAGTTCTTTACATTTGCCTCAAAGGACTCTTTCCACGCACAAGGAGGAGTCTGAAGATGATTCACCCCAACAGCCATATGATCATGAATTAGTTAAGGCAAGTGGAATTTGGCGTAGTCCTGATGCAGCTTCATTGGCATCTCAGCACAAAAATATGGTTGACTTAATTCAGGAAGATTTTCCTCGCACCATGTCACCTGTATATAATAAGTCTCTTTCTGTAAGTCACGGACTAGTGGATAAACCGATTGATTTAGAAGCTGGTTCTAGTTCTTCTCATGGCCCCCCTGTTACTACAATAAAGGCTGGTAAACCTACTATAGGTGCAGATGACATAAGGGTGTCATCAAGTGTCGATACCCATGCCCCAGTTGCAAGCTCATCATCTCTTGAATCCACTGGCAGCATTGGTGTTAGTGACATTGCAACTGTTGAGTCTCAACTAAAGGCTCTTGGTGTATCTAATGTACCAAATTCAGAAAGTCTGAGTTACGAAGAAAAATGGAAGGCAAGCTACCAGAACAATTTGATGCGACACCCGGGATTCCAGCAACAAAACAATCCATATGATGTTCCTAGTGCCAATTCTCAAAATTTAAATTCTGTGTACGTTGGTAGGGAACAATTTCCTTTTAATTCCAGCAAGTTCTCCAATGTCCAGCCACTACTGCAGTCATCTGGTTTTACACCTCCCCTATATGCCACAGCAGCTGCTTATATGTCCTCAGCCAATCCATTTTACACTAATATGGAGGCGTCAGGTATATATACTCCACAATATGTTGGTGGATACACTGTAAATCCCACAGCTTTTCCTCCATATACTGCATACCCTCCTCATGGTGTTCTACCTCTTGTCGTTGATGGAGCTACTAGTTCCAATTATACTCCACTAACACCGGGGGTTTCAATTGGGGGAAACATTTCGCATGGAGCTGAGATGGTACAGACAAACAAGTACCTTGGGCAATTTGGATTTCCTCCGCAGCCTTCTTTTGGTGATCCTATGTACATGCAATATCATCAGCAACCTTTTGTGGAAGGATATGGTATTTCTGGTCATTTTGATCCACTGGCACCTAGAGCAAGTGGTGTTAGCCAAATTAGTCCTTATGATTCGCAAAAAAGGTCCAGTACTGGTGCTTATTTGGATGATAAAAAATTAACTGATCAGAGAACTTCTGCTAATATGAACTCAAGAAGAGGTGGAGTATCGATTCCTAGTTATTTTGGACACATGCCAAACATGGGTTTTGTAATGCAGTATCCGAGTTCACCACTTCCTAGTCCAGTTTTATCAGGATACCCAGAAGGAAGTCCTGGCCTTCCAGGAGTTAGGAATGAAATAAAACTTTCCCCTGCTTCTGGAAGAAATGGAGGCGTAATATCTGGATGGCAAGGTCATAGATCTTTTGACAGTGCTCATGACCCCAAAATGGTTAATTTTCTTGAAGACTTAAAATCTGGCAAAGGTCGAAGATTTGAGCTATCCGATATTATTGGACATATTGTTGAATTTAGCTCTGATCAGCATGGAAGTCGATTTATACAGCAGAAGTTGGAAAGTTGTAGTGGCGAAGAGAAGGCATTGGTGTTTAAAGAGGTTCTTCCACATGCTTCTAAATTAATGACTGATGTATTTGGTAACTACGTAATACAGAAGTTTTTTGAGTATGGAAGCTCGGAGCAGAGGAGGGAACTTGCAGATCGACTTGTTGGCCAGATACTGCCTTTGAGTTTGCAGATGTATGGCTGTCGTGTAATCCAAAAGGCACTTGAGGTTATTGAGCTTGAACAGAAAGCTCAGCTTGTTCATGAGCTAGATGGAAATGTTATGAGATGTGTTCGTGATCAAAATGGTAACCATGTTATTCAAAAGTGCATTGAATCTATTCAAACCAAAAAGATTAGCTTTATACTATCTGCATTTCGTGGTCAAGTTGCTACTCTATCAATGCATCCCTATGGATGCCGAGTCATACAGAGAGTTCTAGAACATTGCATGGACGAGAGTCAATGCCAGTTTATTGTAGATGAAATCTTAGAGTCAGTTTGTGCTCTTGCTCAGGACCAGTATGGTAATTATGTTACACAGCATGTCTTGGAGAGAGGAAAGCCTCAGGAAAGGAGCCAAATTCTCAGCAAGTTGTCAGGACATATTGTTCAATTAAGCCAGCATAAATTTGCTTCAAATGTGGTAGAAAAATGTTTGGAGTATGGTGATGCCACTGAACGGGAGTTGCTAGTTGCAGAGATATTTGGGCATGATGACCAATGTGATAATTTATTGACAATGATGAAAGATCAATTTGCGAATTATGTGGTCCAGAAGGTCATTGATATCTGTTCTGAAAATCAGCGAGCAATGTTGCTTTCTCACGTAAGAATCCATGCTCATGCTTTGAAGAAATACACTTATGGAAAACACATTGTGGCTCGGTTGGAACATCAATTTGGAGAGAATCAAACACCCAGCTCATGA 2949 0.4181 MATESPIRISEAGGKWPSHKEAAAFGSLSRNMATEDLGILLKGHRYQGGGKDVAPNRSGSAPPSIEGSFLAIENLLPQHNTTQNASFANLSSAMQNCESEEQLRADPAYLAYYNSNVNLNPRLPPPLTSWENRHLGRHIISFRNNWRMSTTDDSGKSSLHLPQRTLSTHKEESEDDSPQQPYDHELVKASGIWRSPDAASLASQHKNMVDLIQEDFPRTMSPVYNKSLSVSHGLVDKPIDLEAGSSSSHGPPVTTIKAGKPTIGADDIRVSSSVDTHAPVASSSSLESTGSIGVSDIATVESQLKALGVSNVPNSESLSYEEKWKASYQNNLMRHPGFQQQNNPYDVPSANSQNLNSVYVGREQFPFNSSKFSNVQPLLQSSGFTPPLYATAAAYMSSANPFYTNMEASGIYTPQYVGGYTVNPTAFPPYTAYPPHGVLPLVVDGATSSNYTPLTPGVSIGGNISHGAEMVQTNKYLGQFGFPPQPSFGDPMYMQYHQQPFVEGYGISGHFDPLAPRASGVSQISPYDSQKRSSTGAYLDDKKLTDQRTSANMNSRRGGVSIPSYFGHMPNMGFVMQYPSSPLPSPVLSGYPEGSPGLPGVRNEIKLSPASGRNGGVISGWQGHRSFDSAHDPKMVNFLEDLKSGKGRRFELSDIIGHIVEFSSDQHGSRFIQQKLESCSGEEKALVFKEVLPHASKLMTDVFGNYVIQKFFEYGSSEQRRELADRLVGQILPLSLQMYGCRVIQKALEVIELEQKAQLVHELDGNVMRCVRDQNGNHVIQKCIESIQTKKISFILSAFRGQVATLSMHPYGCRVIQRVLEHCMDESQCQFIVDEILESVCALAQDQYGNYVTQHVLERGKPQERSQILSKLSGHIVQLSQHKFASNVVEKCLEYGDATERELLVAEIFGHDDQCDNLLTMMKDQFANYVVQKVIDICSENQRAMLLSHVRIHAHALKKYTYGKHIVARLEHQFGENQTPSS 982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01526 982 Gene3D - 634 979 IPR011989 -
Gma15g01526 982 MobiDBLite consensus disorder prediction 150 182 - -
Gma15g01526 982 MobiDBLite consensus disorder prediction 242 261 - -
Gma15g01526 982 CDD Pumilio 649 970 IPR033712 GO:0003723
Gma15g01526 982 PANTHER RNA BINDING PROTEIN PUMILIO-RELATED 45 975 - -
Gma15g01526 982 MobiDBLite consensus disorder prediction 165 182 - -
Gma15g01526 982 ProSiteProfiles Pumilio RNA-binding repeat profile. 907 948 IPR001313 GO:0003723
Gma15g01526 982 ProSiteProfiles Pumilio RNA-binding repeat profile. 726 761 IPR001313 GO:0003723
Gma15g01526 982 MobiDBLite consensus disorder prediction 519 556 - -
Gma15g01526 982 ProSiteProfiles Pumilio RNA-binding repeat profile. 835 870 IPR001313 GO:0003723
Gma15g01526 982 Pfam Pumilio-family RNA binding repeat 773 795 IPR001313 GO:0003723
Gma15g01526 982 Pfam Pumilio-family RNA binding repeat 802 837 IPR001313 GO:0003723
Gma15g01526 982 Pfam Pumilio-family RNA binding repeat 917 949 IPR001313 GO:0003723
Gma15g01526 982 Pfam Pumilio-family RNA binding repeat 695 726 IPR001313 GO:0003723
Gma15g01526 982 Pfam Pumilio-family RNA binding repeat 875 908 IPR001313 GO:0003723
Gma15g01526 982 Pfam Pumilio-family RNA binding repeat 840 872 IPR001313 GO:0003723
Gma15g01526 982 Pfam Pumilio-family RNA binding repeat 730 763 IPR001313 GO:0003723
Gma15g01526 982 Pfam Pumilio-family RNA binding repeat 658 692 IPR001313 GO:0003723
Gma15g01526 982 SMART pum_5 913 948 IPR001313 GO:0003723
Gma15g01526 982 SMART pum_5 726 761 IPR001313 GO:0003723
Gma15g01526 982 SMART pum_5 690 725 IPR001313 GO:0003723
Gma15g01526 982 SMART pum_5 871 906 IPR001313 GO:0003723
Gma15g01526 982 SMART pum_5 762 797 IPR001313 GO:0003723
Gma15g01526 982 SMART pum_5 835 870 IPR001313 GO:0003723
Gma15g01526 982 SMART pum_5 654 689 IPR001313 GO:0003723
Gma15g01526 982 SMART pum_5 798 834 IPR001313 GO:0003723
Gma15g01526 982 ProSiteProfiles Pumilio RNA-binding repeat profile. 798 834 IPR001313 GO:0003723
Gma15g01526 982 ProSiteProfiles Pumilio RNA-binding repeat profile. 654 689 IPR001313 GO:0003723
Gma15g01526 982 ProSiteProfiles Pumilio RNA-binding repeat profile. 762 797 IPR001313 GO:0003723
Gma15g01526 982 ProSiteProfiles Pumilio RNA-binding repeat profile. 871 906 IPR001313 GO:0003723
Gma15g01526 982 PANTHER PUMILIO HOMOLOG 5 45 975 - -
Gma15g01526 982 ProSiteProfiles Pumilio RNA-binding repeat profile. 690 725 IPR001313 GO:0003723
Gma15g01526 982 MobiDBLite consensus disorder prediction 150 164 - -
Gma15g01526 982 SUPERFAMILY ARM repeat 638 971 IPR016024 -
Gma15g01526 982 ProSiteProfiles Pumilio homology domain (PUM-HD) profile. 634 974 IPR033133 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01526 Gma-Chr15 14278262 14285341 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01526 K17943 - gmx:100780168 1959.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01526 15 14278262 14285341 Gma09g00520 09 5373701 5381879 GST
Gma17g00571 17 4734578 4741386 Gma15g01526 15 14278262 14285341 PCT
Gma13g00794 13 22220227 22228573 Gma15g01526 15 14278262 14285341 PCT
Gma15g01526 15 14278262 14285341 Gma17g00571 17 4734578 4741386 PCT
Gma15g01526 15 14278262 14285341 Gma13g00794 13 22220227 22228573 PCT