Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00588 ATGGCGGTGGAGTACCAGTGTTGTGAAACTCAGTTTTTCATACGCTTATTGATAATTTTGCTGCTTGTGTTGTTTGCTGGATTGATGTCAGGGCTCACTTTAGGACTCATGTCCTTGAGTCTTGTTGATCTTGAGGTTCTCGCTAAGTCTGGCACCCCTCAGGGTCGCAAACATGCTGCGAAGATATTGCCTGTTGTCAGAAATCAACATTTGTTGCTTTGCACCCTTCTAATTTGTAATGCTGCAGCCATGGAGGCACTTCCTATCTTTCTTGATGGTCTTGTTGTGGCATGGGGTGCTGTCTTGATTTCAGTAACATTAATTCTTCTGTTTGGTGAGATTATACCACAATCAATTTGTTCTCGGTATGGTTTAGCAATTGGTGCAACAGTGGCTCCATTTGTTCGGGTTCTTGTATGGATATGCTTTCCTGTTGCTTATCCAATTAGCAAGTTGTTGGATTATTTGCTGGGGCATCGACATGAAGCCCTTTTCCGCAGAGCTGAGTTGAAAACACTTGTAAATCTGCATGGCAACGAGGCTGGAAAAGGTGGAGAACTGACACATGATGAAACCACAATCATTGCTGGAGCGCTTGAACTTTCTGAGAAGACAGCCAGTGATGCCATGACCCCCATAACTGAAATATTTTCTGTTGATATTAATGCAAAGCTTGATAGCAGGGATTTGATGAGTCTAATATTGGAGAAAGGGCATAGCAGAGTTCCTGTCTATTACGAGCAGCCTACAAATATTTTTGGACTTGTCCTGGCAAAGAATTTATTGACAATTGACCCAGAAGAAGAAATACCCGTGAAAAGTGTGACCATCCGCAGGATTCCAAGGGTTCCAGAAACGTTGCCACTTTATGATATTTTGAATGAGTTCCAGAAGGGCCATAGCCACATGGCTGTTGTTGTCAGACATTTTGAGAAGACAAGGCAACAGTCTTCCAACAATAATGCCGATGTGAGAGATGTAAAGGTAGATATTGATGGGGAGAAGACTCCCCAAGGGAATATTTTGAAGACCAAGAGGTCACTCCAAAAGTGGAAAAGCTTTCCAAACTCAAATAATTCGAATAGGGGTGGTTCCCGGAGCAGGAAATGGTCAAAAAATATGTACTCGTATATTCTAGAAATAGATGGAAATTCACTTCCAAGTTTGCCCGAAAAAGAAGAAGCTGTTGGAATAATTACAATGAAAGATGTCATTGAAGAGCTTTTACAGGAGGAGATCTTTGATGAGACGGATCATCATTTTGAAGACTCATGA 1275 0.418 MAVEYQCCETQFFIRLLIILLLVLFAGLMSGLTLGLMSLSLVDLEVLAKSGTPQGRKHAAKILPVVRNQHLLLCTLLICNAAAMEALPIFLDGLVVAWGAVLISVTLILLFGEIIPQSICSRYGLAIGATVAPFVRVLVWICFPVAYPISKLLDYLLGHRHEALFRRAELKTLVNLHGNEAGKGGELTHDETTIIAGALELSEKTASDAMTPITEIFSVDINAKLDSRDLMSLILEKGHSRVPVYYEQPTNIFGLVLAKNLLTIDPEEEIPVKSVTIRRIPRVPETLPLYDILNEFQKGHSHMAVVVRHFEKTRQQSSNNNADVRDVKVDIDGEKTPQGNILKTKRSLQKWKSFPNSNNSNRGGSRSRKWSKNMYSYILEIDGNSLPSLPEKEEAVGIITMKDVIEELLQEEIFDETDHHFEDS 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00588 424 CDD CBS_pair_CorC_HlyC_assoc 205 313 IPR044751 -
Gma15g00588 424 ProSiteProfiles CNNM transmembrane domain profile. 8 191 IPR002550 -
Gma15g00588 424 SUPERFAMILY CBS-domain pair 194 410 IPR046342 -
Gma15g00588 424 Gene3D - 371 416 IPR046342 -
Gma15g00588 424 PANTHER AND COBALT EFFLUX PROTEIN CORC, PUTATIVE-RELATED 1 424 - -
Gma15g00588 424 ProSiteProfiles CBS domain profile. 210 272 IPR000644 -
Gma15g00588 424 PANTHER ANCIENT CONSERVED DOMAIN PROTEIN-RELATED 1 424 IPR045095 GO:0010960
Gma15g00588 424 Pfam Cyclin M transmembrane N-terminal domain 17 190 IPR002550 -
Gma15g00588 424 Gene3D - 189 326 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00588 Gma-Chr15 4861226 4864990 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00588 K16302 - gmx:100789945 783.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00588 15 4861226 4864990 Gma15g00588 15 4861226 4864990 ECH
Gma15g00588 15 4861226 4864990 Gma13g02250 13 37370386 37375089 GST
Gma07g01805 07 39210300 39215187 Gma15g00588 15 4861226 4864990 PCT
Gma08g00605 08 4961633 4966849 Gma15g00588 15 4861226 4864990 PCT
Gma15g00588 15 4861226 4864990 Gma07g01805 07 39210300 39215187 PCT
Gma15g00588 15 4861226 4864990 Gma08g00605 08 4961633 4966849 PCT