Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01805 ATGGCGGTGGAGTACACATGCTGCTCAACGGCGTTCTTCGTTCACATAGTGGTAATCGTGCTGCTGGTGCTGTTCGCGGGCCTCATGTCGGGCCTCACCTTGGGCCTCATGTCGCTCAGCCTCGTTGATCTTGAGGTTCTCGCTAAGTCCGGCACTCCTCAGGATCGTAAACACGCTGAGAAGATATTACCAGTTGTCAAAAACCAACATTTATTGCTATGTACTCTTCTAATTTGCAATGCTGCGGCCATGGAGACACTTCCTATTTTTCTTGATGGTCTTGTTACTGCTTGGGGCGCTATCCTGATTTCAGTGACATTAATTCTTTTGTTTGGTGAGATTATACCCCAATCAGTTTGTTCTCGGTATGGTTTGGCTATTGGTGCATCAGTGGCTCCCTTTGTCCGTGTGCTTGTATGCATATGTTTCCCAGTTGCCTTTCCAATTAGTAAGTTGTTGGATTTTTTGCTGGGCCATCGACATGAAGCCCTATTCCGTAGAGCTGAGTTGAAAACACTCGTAAATTTGCATGGTAATGAGGCTGGAAAAGGGGGGGAACTGACACATGATGAAACAACGATCATTGCTGGGGCACTTGAACTCAGTGAGAAGACAGCGAGTGATGCCATGACTCCTATATCTGAAACATTTACCGTTGATATTAATTCAAAGCTTGATAGCAGGGAACTGATGAATGAAATATTGGAGAAAGGGCACAGCAGAGTCCCAGTCTATTATGAGCAGCCTACAAACATTATTGGCCTTGTACTGGTCAAGAATTTATTGACAGTTCACCCAGAAGATGAAGCACCCGTGAAGAGTGTAACCATACGCAGGATTCCAAGGGTTCCAGAAAGTATGCCACTTTATGACATTTTGAATGAGTTTCAGAAGGGCCATAGTCACATGGCTGTTGTTGTCAGACGGTGTGACAAGACTAACCAACAATCTTCCCAAAATAATGCAAATGACTCGGTGAGAGATGTTAAGGTGGATATTGATGGTGAAAAGCCTCCCAAAGAGAAAGCTTTGAAACCCAAGATGCCACTCCACAAGTGGAAAAGCTTTCCAAATACAAACAAGTCATCAAATAGGGGTTCTCGGAGCAGAAAATGGTCAAAAAATATGTACTCGGATATTTTAGAGATAGATGGAAGTCCACTTCCAAAGCTCCCTGAAGAAGAAGAAGCTGTTGGAATTATTACCATGGAAGATGTCATTGAAGAGCTTTTGCAGGAGGAGATCTTTGATGAGACGGATCATCATTTTGAAGACTCATAA 1281 0.4379 MAVEYTCCSTAFFVHIVVIVLLVLFAGLMSGLTLGLMSLSLVDLEVLAKSGTPQDRKHAEKILPVVKNQHLLLCTLLICNAAAMETLPIFLDGLVTAWGAILISVTLILLFGEIIPQSVCSRYGLAIGASVAPFVRVLVCICFPVAFPISKLLDFLLGHRHEALFRRAELKTLVNLHGNEAGKGGELTHDETTIIAGALELSEKTASDAMTPISETFTVDINSKLDSRELMNEILEKGHSRVPVYYEQPTNIIGLVLVKNLLTVHPEDEAPVKSVTIRRIPRVPESMPLYDILNEFQKGHSHMAVVVRRCDKTNQQSSQNNANDSVRDVKVDIDGEKPPKEKALKPKMPLHKWKSFPNTNKSSNRGSRSRKWSKNMYSDILEIDGSPLPKLPEEEEAVGIITMEDVIEELLQEEIFDETDHHFEDS 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01805 426 Pfam Cyclin M transmembrane N-terminal domain 18 190 IPR002550 -
Gma07g01805 426 MobiDBLite consensus disorder prediction 333 371 - -
Gma07g01805 426 SUPERFAMILY CBS-domain pair 194 412 IPR046342 -
Gma07g01805 426 MobiDBLite consensus disorder prediction 355 371 - -
Gma07g01805 426 ProSiteProfiles CNNM transmembrane domain profile. 8 191 IPR002550 -
Gma07g01805 426 MobiDBLite consensus disorder prediction 333 348 - -
Gma07g01805 426 Gene3D - 381 418 IPR046342 -
Gma07g01805 426 Gene3D - 191 326 IPR046342 -
Gma07g01805 426 PANTHER ANCIENT CONSERVED DOMAIN PROTEIN-RELATED 1 426 IPR045095 GO:0010960
Gma07g01805 426 ProSiteProfiles CBS domain profile. 210 272 IPR000644 -
Gma07g01805 426 PANTHER AND COBALT EFFLUX PROTEIN CORC, PUTATIVE-RELATED 1 426 - -
Gma07g01805 426 CDD CBS_pair_CorC_HlyC_assoc 205 307 IPR044751 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01805 Gma-Chr7 39210300 39215187 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01805 K16302 - gmx:100801937 774.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g01805 07 39210300 39215187 Gma08g00605 08 4961633 4966849 GST
Gma07g01805 07 39210300 39215187 Gma15g00588 15 4861226 4864990 PCT
Gma07g01805 07 39210300 39215187 Gma13g02250 13 37370386 37375089 PCT
Gma15g00588 15 4861226 4864990 Gma07g01805 07 39210300 39215187 PCT
Gma13g02250 13 37370386 37375089 Gma07g01805 07 39210300 39215187 PCT