Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02250 ATGGCGGTGGAGTATCAGTGTTGTGAAACTCAGTTTTTCTTACGGTTATTGATAATTCTGCTGCTTGTGTTGTTTGCTGGATTGATGTCAGGGCTCACTTTAGGACTCATGTCCTTGAGTCTTGTTGATCTTGAGGTTCTCGCTAAGTCTGGCACCCCTCAGGATCGCAAACATGCTGCGAAGATATTACCTGTTGTCAGAAATCAACATTTGTTGCTTTGCACCCTTCTAATTTGTAATGCTGCAGCCATGGAGGCACTTCCTATCTTTCTTGATAGTCTTGTTGTGGCGTGGGGTGCTGTCTTGATTTCAGTAACGTTAATTCTTCTATTTGGTGAGATTATACCACAATCAATTTGTTCTCGGTATGGCTTAGCAATTGGTGCAACGGTGGCTCCATTTGTCCGGGTTCTTGTATGGATATGCTTTCCTGTTGCTTATCCAATTAGCAAGTTGTTGGATTATTTGCTGGGGCATCGACATGAAGCCCTTTTCCGCAGAGCTGAGTTGAAAACACTTGTAAATCTGCATGGCAATGAGGCTGGAAAAGGTGGAGAACTGACACATGATGAAACCACAATCATTGCTGGAGCGCTTGAACTCTCTGAGAAGACAGCCAGTGATGCCATGACTCCCATAACTGATATATTTTCTATTGATATTAATTCAAAGCTTGATAGGGATTTGATGAATCTAATATTGGAGAAAGGGCATAGCAGAGTTCCTGTCTATTATGAGCAGCCTACAAATATTATTGGACTTGTTCTGGTCAAGAATTTATTGACAATTGACCCAGAAGAAGAAATACCCGTGAAAAATGTGACCATCCGAAGAATTCCAAGGGTTCCAGAAACGTTGCCACTTTATGATATTTTGAATGAGTTCCAGAAGGGCCATAGCCACATGGCTGTTGTTGTCAGACATTGTGAGAAGACAGGGCAACAGTCTTCCAACAATAATGCCGATGTGAGAGATGTAAAGGTAGATATTGATGGGGAGAAGAATCCCCAAGAGAATATGTTGAAGACCAAGAGGTCACTCCAAAAGTGGAAAAGCTTTCCAAACTCAAATAATTCGAATAGGGGTGGTTCCCGAAGCAGAAAATGGTCAAAAAATATGTACTCGGATATTCTGGAAATAGATGGAAATTCACTTCCAAGTTTGCCCGAAAAAGAAGAAGCTGTTGGAATAATTACAATGGAAGATGTCATTGAAGAGCTTTTACAGGAGGAGATCTTTGATGAGACGGATCATCATTTTGAAGACTCATGA 1272 0.4127 MAVEYQCCETQFFLRLLIILLLVLFAGLMSGLTLGLMSLSLVDLEVLAKSGTPQDRKHAAKILPVVRNQHLLLCTLLICNAAAMEALPIFLDSLVVAWGAVLISVTLILLFGEIIPQSICSRYGLAIGATVAPFVRVLVWICFPVAYPISKLLDYLLGHRHEALFRRAELKTLVNLHGNEAGKGGELTHDETTIIAGALELSEKTASDAMTPITDIFSIDINSKLDRDLMNLILEKGHSRVPVYYEQPTNIIGLVLVKNLLTIDPEEEIPVKNVTIRRIPRVPETLPLYDILNEFQKGHSHMAVVVRHCEKTGQQSSNNNADVRDVKVDIDGEKNPQENMLKTKRSLQKWKSFPNSNNSNRGGSRSRKWSKNMYSDILEIDGNSLPSLPEKEEAVGIITMEDVIEELLQEEIFDETDHHFEDS 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02250 423 Gene3D - 377 415 IPR046342 -
Gma13g02250 423 Pfam Cyclin M transmembrane N-terminal domain 17 190 IPR002550 -
Gma13g02250 423 PANTHER ANCIENT CONSERVED DOMAIN PROTEIN-RELATED 1 423 IPR045095 GO:0010960
Gma13g02250 423 Gene3D - 191 324 IPR046342 -
Gma13g02250 423 ProSiteProfiles CNNM transmembrane domain profile. 8 191 IPR002550 -
Gma13g02250 423 PANTHER AND COBALT EFFLUX PROTEIN CORC, PUTATIVE-RELATED 1 423 - -
Gma13g02250 423 SUPERFAMILY CBS-domain pair 194 409 IPR046342 -
Gma13g02250 423 MobiDBLite consensus disorder prediction 349 368 - -
Gma13g02250 423 CDD CBS_pair_CorC_HlyC_assoc 205 306 IPR044751 -
Gma13g02250 423 ProSiteProfiles CBS domain profile. 210 271 IPR000644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02250 Gma-Chr13 37370386 37375089 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02250 K16302 - gmx:100795897 791.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02250 13 37370386 37375089 Gma13g02250 13 37370386 37375089 ECH
Gma15g00588 15 4861226 4864990 Gma13g02250 13 37370386 37375089 GST
Gma07g01805 07 39210300 39215187 Gma13g02250 13 37370386 37375089 PCT
Gma08g00605 08 4961633 4966849 Gma13g02250 13 37370386 37375089 PCT
Gma13g02250 13 37370386 37375089 Gma07g01805 07 39210300 39215187 PCT
Gma13g02250 13 37370386 37375089 Gma08g00605 08 4961633 4966849 PCT