Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00605 ATGGCGGTGGAGTACACATGCTGCTCAACGGCCTTCTTCGTTCACATACTGGTCATCGTGCTGCTCGTGCTTTTCGCGGGCCTCATGTCGGGCCTCACCTTGGGCCTCATGTCGCTCAGCCTCGTTGATCTTGAAGTTCTTGCTAAGTCTGGTACTCCTCAGGATCGTAAACACGCTGAGAAGATATTACCAGTTGTCAAAAACCAACATTTATTGCTATGTACTCTGCTAATTTGCAATGCTGCAGCCATGGAGACACTTCCTATTTTTCTTGATGGCCTTGTTACTGCATGGGGCGCTATCCTAATTTCTGTGACATTAATTCTTTTGTTTGGTGAGATTATACCCCAATCAGTTTGTTCTCGGTATGGTTTGGCTATTGGTGCATCAGTGGCTCCCTTTGTCCGTGTGCTTGTATGCATATGTTTTCCAGTTGCCTATCCAATTAGTAAGTTATTAGATTTTTTGCTGGGCCATCGACATGAAGCCCTATTCCGTAGAGCTGAGTTGAAAACACTCGTAAATTTGCATGGTAATGAGGCTGGAAAAGGGGGGGAACTGACACATGATGAAACAACGATCATTGCCGGGGCACTTGAACTCAGTGAGAAGACGGCGAGTGATGCCATGACTCCTATATCTGAAACATTTACTGTTGATATTAATTCAAAGCTTGATAGGGAACTGATGAATGAGATATTGGAGAAAGGGCACAGCAGAGTCCCAGTCTATTATGAGCAGCCTACAAACATTATTGGACTTGTACTGGTCAAGAATTTATTGACAGTTCATCCAGAAGATGAAGCACCCATGAAGAGTGTAACCATACGCAGGATTCCAAGGGTTCCAGAAAGTATGCCACTTTATGACATTTTGAATGAGTTTCAGAAGGGCCATAGCCACATGGCAGTTGTTGTCAGACGGTGTGACAAGACTAACCAACAATCTTCCCAAAATAATGCAAATGACTCGGTGAGAGATGTTAAGGTGGATATTGATGGTGAAAAGCCTCCCAAAGAGAAAGCTTTGAAACCCAAGATGCCACTCCACAAGTGGAAAAGCTTTCCAAATACAAACAAGTCATCAAATAGGGGTTCTCGGAGCAGAAAATGGTCAAAAAATATGTACTCGGATATTTTGGAGATAGATGGAAGTCCCCTTCCAAAGCTCCCTGAAGAAGAAGAAGCCGTTGGAATTATTACCATGGAAGATGTCATTGAAGAGCTTTTACAGGAGGAGATCTTTGATGAGACAGATCATCATTTTGAAGACTCATAA 1278 0.4327 MAVEYTCCSTAFFVHILVIVLLVLFAGLMSGLTLGLMSLSLVDLEVLAKSGTPQDRKHAEKILPVVKNQHLLLCTLLICNAAAMETLPIFLDGLVTAWGAILISVTLILLFGEIIPQSVCSRYGLAIGASVAPFVRVLVCICFPVAYPISKLLDFLLGHRHEALFRRAELKTLVNLHGNEAGKGGELTHDETTIIAGALELSEKTASDAMTPISETFTVDINSKLDRELMNEILEKGHSRVPVYYEQPTNIIGLVLVKNLLTVHPEDEAPMKSVTIRRIPRVPESMPLYDILNEFQKGHSHMAVVVRRCDKTNQQSSQNNANDSVRDVKVDIDGEKPPKEKALKPKMPLHKWKSFPNTNKSSNRGSRSRKWSKNMYSDILEIDGSPLPKLPEEEEAVGIITMEDVIEELLQEEIFDETDHHFEDS 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00605 425 Pfam Cyclin M transmembrane N-terminal domain 17 190 IPR002550 -
Gma08g00605 425 Gene3D - 380 417 IPR046342 -
Gma08g00605 425 PANTHER ANCIENT CONSERVED DOMAIN PROTEIN-RELATED 1 425 IPR045095 GO:0010960
Gma08g00605 425 SUPERFAMILY CBS-domain pair 194 411 IPR046342 -
Gma08g00605 425 ProSiteProfiles CBS domain profile. 210 271 IPR000644 -
Gma08g00605 425 Gene3D - 191 325 IPR046342 -
Gma08g00605 425 PANTHER AND COBALT EFFLUX PROTEIN CORC, PUTATIVE-RELATED 1 425 - -
Gma08g00605 425 ProSiteProfiles CNNM transmembrane domain profile. 8 191 IPR002550 -
Gma08g00605 425 MobiDBLite consensus disorder prediction 332 370 - -
Gma08g00605 425 CDD CBS_pair_CorC_HlyC_assoc 205 306 IPR044751 -
Gma08g00605 425 MobiDBLite consensus disorder prediction 354 370 - -
Gma08g00605 425 MobiDBLite consensus disorder prediction 332 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00605 Gma-Chr8 4961633 4966849 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00605 K16302 - gmx:100808328 780.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g01805 07 39210300 39215187 Gma08g00605 08 4961633 4966849 GST
Gma08g00605 08 4961633 4966849 Gma15g00588 15 4861226 4864990 PCT
Gma08g00605 08 4961633 4966849 Gma13g02250 13 37370386 37375089 PCT
Gma15g00588 15 4861226 4864990 Gma08g00605 08 4961633 4966849 PCT
Gma13g02250 13 37370386 37375089 Gma08g00605 08 4961633 4966849 PCT