Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00312 ATGGCTTTTCTGTTTGCCTTTGTTGCTATTGTGGTGTGGGGTTGTGCTGCGGGTAAAGAGTGCACAAACAATGATGCCCAATCACATACTTTCCGGTACCAGTTATCCACATCCACGAATGAAACTTGGAACATAATGTCACATAATCATTTGACGACAAAGGATGACCATTTATTGGCTGATTTGCTACCAAGGAAGTTGTTGAAAGAGGAAAATCAACGTAATTTGGATATGTTGAGGAAAATTGAGAAAGTGGGTGTGTTGAAGCCCCCCCAGCAACCCCAAGGTTTTCTCAAACCAGTGTCTCTGCATGATGTGAGATTGAATCAAGGTTCAATCCATGCTCAGGCACAACGAACAAACTTAGAGTATCTGTTGATGTTGAATGTGGACAGGTTACTCTGGAGCTTTAGGAAGACAGCTGGCCTTCCAACTCCTGGAACACCATATGGAGGGTGGGAAGATCCAAAAATGGAGCTTCGGGGGCATTTTGTTGGTCACTACTTGAGTGCATCAGCATTAATGTGGGCCAGCACACATAATGATAGCCTGAAGAAGAAAATGTCTGCTCTTGTTGCCAATCTCTCTATCTGCCAGGAGAAAATTGGCACAGGATATCTCTCTGCCTTTCCATCTGAATTTTTTGATCGACTTGAAGCTACTAAGTATGTTTGGGCTCCCTATTACACCACTCACAAGATCTTGGCTGGCCTTTTGGATCAACATTCTATAGCAGAAAATCCTCAAGCTCTAAAAATGGTGACATGGATGGTTGATTACTTTTACAACCGAGTGCAGAATGTTATAACAAAGTTTAGTATAAGTAGACACTATCAATCACTGAATGAGGAAACTGGAGGCATGAATGATGTCCTTTACAAACTATACAGCATAACGGGAGATCCCAGGCATCTATTGTTAGCTCACCTTTTTGACAAGCCATGCTTTCTAGGGTTGCTCGCAGTGAAGGCGAATGATATAGCTCATTTTCATGCTAATACACATATCCCAGTGATTGTTGGATCTCAAATGCGGTATGAAGTCACTGGTGATCCACTTTATAAGGAAATAGGAACACTCTTTATGGATCTTGTTAACTCTTCTCATACTTATGCAACTGGAGGGACATCAGTCAACGAATTTTGGAGTGATCCAAAGAGAATGGCAGACACCCTAGAATCCACCGACAATGAGGAATCATGCACAACTTACAATATGTTGAAGGTTTCACGCCACTTGTTTACATGGACCAAAAAAGTATCATATGCAGATTATTATGAGCGTGCCTTAACAAATGGTGTATTAAGCATTCAAAGAGGAACAGAACCTGGAGTGATGATATATATGCTTCCACAAGGTCGTGGGGTTTCCAAGGCTAAAACTTACTTTGGTTGGGGAACCAAGTTTGATAGTTTTTGGTGCTGCTATGGGACAGGAATTGAATCATTCTCAAAGCTGGGAGATTCTATCTATTTTGAAGAGCAAGGGGAAAATCCTACTCTTTACATCATCCAATACATATCAAGCTTATTTAATTGGAAATCTGGGCAAATTATCCTTAATCAGACAGTTGTTCCACCTGCTTCATGGGATCCTTTCCTACGAGTGTCATTTACATTTTCTCCTGCTAAGAAAACTGGTGCTTTGTCTACGCTTAACTTCAGACTACCAACTCGGATGCACAAGAATGGTGAAAAAGGCATATTAAATAATGAGACTTTAACTCTGCCAGGGCCAGGCAATTTTTTGTCGATCACGCGAAAATGGAATGCTGGTGACAAGCTAAGCCTTCAATTGCCCCTTACCCTCAGAGCAGAGGCCATAAAAGATGATAGGACTAAATATGCCTCTATTCAAGCAATTCTTTATGGTCCCTATCTTCTTGCTGGTCACACCACTGGTGATTGGAACATTAAAACTGCAGCAAATGCTTCTATAGCAGACTGGATTACTCCAATTCCAGCCAGCTACAACATCCACTTATTCTACTTCTCCCAAGCCTTTGCAAACTCGACTTTTGTTTTGACAAACTCAAACCAATCATTAGCAGTGAAAAAAGTACCTGAGCCTGGAACTGATTCAGCTCTTGGTGCCACTTTTAGAGTTATCCAAGGAAAATCTTCCACAAAGTTTACCACATTGACAGATGCTATTGGTAAATCAGTGATGTTAGAACCATTTGATCATCCGGGAATGCAAGTGATTCACCAAGGAATAGAACTTCCTCTTACAGTCGTAGGCTCTTCCCTCTGGTGGACCATCTTCTGTTTTTGTTGTGGTACCGGGATTGGATGGACGAAAAGAAACCATATCTTTAGAATCCAAAAGCCATAA 2334 0.4135 MAFLFAFVAIVVWGCAAGKECTNNDAQSHTFRYQLSTSTNETWNIMSHNHLTTKDDHLLADLLPRKLLKEENQRNLDMLRKIEKVGVLKPPQQPQGFLKPVSLHDVRLNQGSIHAQAQRTNLEYLLMLNVDRLLWSFRKTAGLPTPGTPYGGWEDPKMELRGHFVGHYLSASALMWASTHNDSLKKKMSALVANLSICQEKIGTGYLSAFPSEFFDRLEATKYVWAPYYTTHKILAGLLDQHSIAENPQALKMVTWMVDYFYNRVQNVITKFSISRHYQSLNEETGGMNDVLYKLYSITGDPRHLLLAHLFDKPCFLGLLAVKANDIAHFHANTHIPVIVGSQMRYEVTGDPLYKEIGTLFMDLVNSSHTYATGGTSVNEFWSDPKRMADTLESTDNEESCTTYNMLKVSRHLFTWTKKVSYADYYERALTNGVLSIQRGTEPGVMIYMLPQGRGVSKAKTYFGWGTKFDSFWCCYGTGIESFSKLGDSIYFEEQGENPTLYIIQYISSLFNWKSGQIILNQTVVPPASWDPFLRVSFTFSPAKKTGALSTLNFRLPTRMHKNGEKGILNNETLTLPGPGNFLSITRKWNAGDKLSLQLPLTLRAEAIKDDRTKYASIQAILYGPYLLAGHTTGDWNIKTAANASIADWITPIPASYNIHLFYFSQAFANSTFVLTNSNQSLAVKKVPEPGTDSALGATFRVIQGKSSTKFTTLTDAIGKSVMLEPFDHPGMQVIHQGIELPLTVVGSSLWWTIFCFCCGTGIGWTKRNHIFRIQKP 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00312 777 SUPERFAMILY Six-hairpin glycosidases 161 474 IPR008928 GO:0005975
Gma15g00312 777 PANTHER - 9 749 - -
Gma15g00312 777 Pfam Beta-L-arabinofuranosidase, GH127 105 629 IPR012878 -
Gma15g00312 777 PANTHER PROLINE-TRNA LIGASE (DUF1680) 9 749 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00312 Gma-Chr15 2706795 2712339 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00312 K09955 - gmx:100791803 1137.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00312 15 2706795 2712339 Gma15g00312 15 2706795 2712339 ECH
Gma15g00312 15 2706795 2712339 Gma12g00497 12 4124161 4130405 PCT
Gma15g00312 15 2706795 2712339 Gma11g01196 11 10190782 10196406 PCT
Gma12g00496 12 4116461 4118881 Gma15g00312 15 2706795 2712339 PCT
Gma11g01195 11 10179030 10186601 Gma15g00312 15 2706795 2712339 PCT