Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01195 ATGGAAGCTTTTGTGTTTGTGTTTGTGGTCCTTGTGTTGTGTGGTTGTGCTGCTGGTAAGGAGTGCACAAACATTCCTACACAATCACACACGCTAAGGTACCAGCTATTGACATCCAAGAATGGAAGATTGGAGGAAAAGGCCATGTCTCACTTTCATTTGACGCCTACAGATGAATCTGAATGGGCAGATTTGCTGCCGAGGAAATTATTGACAGAACAACATCAACACGATTGGGCGGTTATGTATAAGAATATTAAGAACATGGGTGTGTTCAAGTCACCTGAAGGCTTTCTCAAAGAAGTTCCTCTTCAGGATGTGAGGTTGCATGAGGATTCCATCCATGGTATAGCACAACAGACAAATTTGGAGTATCTTTTGATGTTGGATGTGGACAGCTTGATTTGGAGCTTTAGGAAGACGGCTGGTCTATCCACACCTGGGACTCCTTATGGAGGGTGGGAAGCTCCAGACGTTGAGCTCCGGGGTCATTTTGTTGGGCATTACTTGAGTGCATCAGCTCTAATGTGGGCCATCACACAGAATGATACCCTGAAACAGAAAATGTCATACCTCGTTGCTGGTCTGTCTGACTGTCAGAAGAAAATTGGAACTGGATATCTATCTGCCTTTCCATCTGAGTTGTTTGATCGATTTGAAGCTATTCAAGAAGTTTGGGCTCCATACTATACCATTCACAAGATCTTGGCCGGCCTCTTGGACCAACATACTTTTGCTGGAAACCCTCAAGCTCTAAAAATGGTAACATGGATGGTTGATTACTTCTACAACAGAGTCCAGACTGTAATAACAAAGTACACTTTAAATAGGCACTATGAATCACTGAATGAGGAAACTGGAGGAATGAATGACGTCCTTTATAAGTTATACATCATAACGGGAGATTCTAAGCATCTATTGTTGGCTCACCTTTTTGATAAGCCATGCTTTTTAGGGTTGCTTGCAGTGCAGGCTAATGACATAGCTGATTTTCATGCTAATACACATATCCCAGTTGTTGTTGGATCTCAAATGCGGTATGAAATCACAGGCGATCCACTTTATCAGCAAATTGGGACATTCTTTATGGACCTCGTAAACTCTTCTCACAGTTATGCAACTGGAGGGACATCAGTCAGCGAGTTCTGGAGTGATCCAAAGAGAATGGCAGATACCTTAAAAACGACAGAGAATGAAGAATCATGCACAACTTATAATATGTTGAAGGTTTCGCGCCACCTGTTTAAATGGACCAAAGAAGTCTCTTATGCAGACTATTACGAACGTGCCTTGACCAATGGTGTGCTCAGCATTCAAAGAGGAACCGATCCTGGAGTGATGATTTATATGCTTCCACTAGGTCTTGGGGTTTCCAAGGCTAAAACTTACCATAGTTGGGGAACGCCATTTGACTCTTTCTGGTGCTGCTATGGAACGGGAATTGAATCGTTCTCAAAGCTGGGAGATTCTATCTATTTTGAAGAGGAAGGCAAAGATCCTACACTTTACATCATTCAGTACATATCAAGCTCGTTTAATTGGAAATCTGGCAAAGTTTTGCTCAATCAGACAGTTGATCCAGTTGCTTCATGGGATCCTTACCTACGAGTGGCATTTACGTTTTCTCCATTTGAGAATACTTTGACTACAAACTCTACATTGAACTTTCGACTCCCAACTTGGACTCATCTGGATGGTGCCAAGGGGATATTAAATGCTGAAACTTTATCTCTACCAAGTCCAGGAAATTATTTATCAATCACAAGACAATGGAGTGGTAGTGACAAGCTGACCCTTCAGCTGCCCCTTACCGTAAGGACAGAGGCCATAAAAGATGACAGGCCAGAATATGCCTCTGTTCAAGCAATTCTTTATGGTCCTTATCTTCTTGCGGGTCATACAACTGGTGTTGATTGGGATCTTAAAGCTGGGGCTAACAATTCAGACTGGATTACTCCTATTCCTGCCAGTTACAATAGTCAACTAGTTTCTTTTTCTCAAGACTTTGAAAATTCAACTTTTATTTTGGCAAATTCAAATCAATCACTTGCAATGCAAAAATTGCCTCTATCTGGCACTGATTTGGCTCTTCAGGCAACCTTTAGGCTTGTTGTCCTAAATGAATCTTCCTCAAAGTTTTCAACATTGGCAGATGCTAATGGTAAATCAGTGATGTTAGAACCATTTGATTTTCCTGGAATGAATGTGGTTAACCAAGGAGCAGACAAACCTCTTCTCATCATAGATTCATCCCATGGCGGGACATCTTCTGTTTTTCTTGTAGTTCCGGGACTGGATGGACGAAATGAAACCATATCTTTAGAATCCCAGAGCTACAATGGCTGTTATGTGTATAGTGGTATGAGCTCTATTGCAGGAGTGAAGCTCAGTTGCAAATCTGGTTCTGATGCTAGTTTTAACCAAGCAACAAGCTTTGTTGCTCAAAAAGGATTGAGCCAATACAATCCTATCAGTTTTGTGGCTAAAGGGGCAAACAGGAATTTTCTTTTGGAGCCACTATTCTCATTCAGAGATGAGCATTATACTGTTTATTTCAACATTCAAGGTTGA 2571 0.415 MEAFVFVFVVLVLCGCAAGKECTNIPTQSHTLRYQLLTSKNGRLEEKAMSHFHLTPTDESEWADLLPRKLLTEQHQHDWAVMYKNIKNMGVFKSPEGFLKEVPLQDVRLHEDSIHGIAQQTNLEYLLMLDVDSLIWSFRKTAGLSTPGTPYGGWEAPDVELRGHFVGHYLSASALMWAITQNDTLKQKMSYLVAGLSDCQKKIGTGYLSAFPSELFDRFEAIQEVWAPYYTIHKILAGLLDQHTFAGNPQALKMVTWMVDYFYNRVQTVITKYTLNRHYESLNEETGGMNDVLYKLYIITGDSKHLLLAHLFDKPCFLGLLAVQANDIADFHANTHIPVVVGSQMRYEITGDPLYQQIGTFFMDLVNSSHSYATGGTSVSEFWSDPKRMADTLKTTENEESCTTYNMLKVSRHLFKWTKEVSYADYYERALTNGVLSIQRGTDPGVMIYMLPLGLGVSKAKTYHSWGTPFDSFWCCYGTGIESFSKLGDSIYFEEEGKDPTLYIIQYISSSFNWKSGKVLLNQTVDPVASWDPYLRVAFTFSPFENTLTTNSTLNFRLPTWTHLDGAKGILNAETLSLPSPGNYLSITRQWSGSDKLTLQLPLTVRTEAIKDDRPEYASVQAILYGPYLLAGHTTGVDWDLKAGANNSDWITPIPASYNSQLVSFSQDFENSTFILANSNQSLAMQKLPLSGTDLALQATFRLVVLNESSSKFSTLADANGKSVMLEPFDFPGMNVVNQGADKPLLIIDSSHGGTSSVFLVVPGLDGRNETISLESQSYNGCYVYSGMSSIAGVKLSCKSGSDASFNQATSFVAQKGLSQYNPISFVAKGANRNFLLEPLFSFRDEHYTVYFNIQG 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01195 856 SUPERFAMILY Six-hairpin glycosidases 163 474 IPR008928 GO:0005975
Gma11g01195 856 Pfam Beta-L-arabinofuranosidase, GH127 107 631 IPR012878 -
Gma11g01195 856 PANTHER - 7 855 - -
Gma11g01195 856 SUPERFAMILY AbfB domain 756 837 IPR036195 GO:0046373|GO:0046556
Gma11g01195 856 Gene3D - 714 844 - -
Gma11g01195 856 PANTHER PROLINE-TRNA LIGASE (DUF1680) 7 855 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01195 Gma-Chr11 10179030 10186601 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01195 K09955 - gmx:100791803 1736.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00496 12 4116461 4118881 Gma11g01195 11 10179030 10186601 GST
Gma11g01195 11 10179030 10186601 Gma15g00312 15 2706795 2712339 PCT