Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00497 ATGAGAATGGAGGCGTTAGTGTTTGCGCTTGTGGCCATTCTGTTGTGTGGTTGTGATGCTGCTAAAGAATGCACAAACATTCCTACACAATCTCATACATTCAGGTATGAGCTATTGATGTCCACTAATGCAACGTGGAAAGCAGAGGTGATGGATCACTACCATTTGACGCCAACGGATGAAACGGCTTGGGCGGATTTGCTGCCGAGGAAGTTATTGTCAGAACAGAACCAACATGACTGGGGGGTGATGTATAGGAAGATTAAGAACATGGGTGTGTTCAAGTCAGGTGAAGGATTTCTCAAAGAAGTGCCTCTTCAGGATGTGAGGTTGCATAAGGATTCCATCCATGGTAGAGCACAGCAAACAAATTTGGAGTATCTGTTGATGTTGGATGTGGACAGCTTGATTTGGAGCTTCAGGAAGACAGCTGCTCTATCCACACCTGGGACTCCTTATGGAGGGTGGGAAGGTCCAGAAGTTGAGCTCAGAGGTCATTTTGTTGGGCATTACTTGAGCGCATCAGCTCTAATGTGGGCCAGCACACAGAATGATACCCTGAAGCAGAAAATGTCATCTCTTGTTGCTGGTCTGTCTGCCTGTCAGGAGAAAATTGGAACCGGATATCTATCTGCATTTCCATCTGAGTTTTTTGATCGATTTGAAGCTGTTCAACCTGTTTGGGCTCCCTATTATACCATTCACAAGATCTTGGCTGGCCTCTTGGATCAACATACTTTTGCTGGAAACCCTCAAGCTCTAAAAATGGTAACATGGATGGTTGATTACTTCTACAACAGAGTGCAGAATGTAATAACAAAGTACACTGTAAATAGACACTATCAATCAATGAATGAAGAAACTGGAGGAATGAATGATGTCCTTTATAGATTATACAGCATAACGGGAGATTCTAAGCACCTAGTGTTGGCTCACCTTTTTGACAAGCCATGCTTTTTAGGGTTGCTTGCAGTGCAGGCTAATGACATAGCTGATTTACATGCTAATACACATATCCCAATTGTTGTTGGATCTCAAATGCGGTATGAAATCACAGGCGATCCACTTTATAAGCAAATTGGCACATTCTTTATGGACCTCGTAAACTCTTCTCACAGCTACGCAACTGGAGGGACATCAGTCAGAGAGTTCTGGAGTGATCCAAAGAGAATAGCAGACAACTTAAGAACGACAGAGAATGAAGAATCATGCACAACTTATAATATGTTGAAGGTTTCGCGTCACCTGTTTAGATGGACCAAAGAAGTCTCTTATGCAGACTATTATGAGCGTGCCTTAACCAATGGTGTGCTCAGCATTCAAAGAGGAACAGATCCTGGAGTGATGATTTATATGCTTCCACTAGGTTTTGCGGTTTCAAAGGCTAGAACTGGACATAGTTGGGGAACACAGTTTGACTCTTTCTGGTGCTGCTATGGAACAGGAATTGAATCATTCTCAAAGCTGGGGGATTCTATCTATTTTGAAGAGGAAGGCAAAGATCCTACACTTTACATCATTCAGTACATTTCAAGCTCATTTAATTGGAAATCAGGCAAAATTTTGCTCAATCAGACAGTTGTTCCAGCTTCTTCATCGGATCCTTACCTACGAGTCACATTTACATTTTCTCCTGTTGAGAATACTTTGTCTACATTGAACTTTCGACTACCAAGTTGGACTCTTCTGGATGGTGCCAAGGGGATATTAAATGGTCAAACTTTATCTCTGCCAAATCCAGGAAATTATTTGTCAATCACAAGACAATGGAGTGCTAGTGACAAGCTGACCCTTCAGCTGCCCCTTACCGTAAGGACAGAGGCCATAAAAGATGACAGGCCTGAATATGCATCTGTTCAAGCAATTCTTTATGGTCCTTACCTTCTTGCTGGTCATACAACCGGTGGTGATTGGAACCTTAAAGCTGGGGCTAACAATGCAGACTGGATTACTCCTATTCCTGCCAGTTACAATAGTCAGCTAGTTTCTTTTTTCCGAGACTTTGAAGGATCAACTTTTGTCTTGGCAAATTCAAACCAATCAGTTTCAATGCAAAAATTGCCTGAATTTGGCACTGATTTGGCTCTTCAGGCAACCTTTAGGATTGTCCTAGAAGAATCTTCCTCAAAGTTTTCAAAATTAGCAGATGCTAATGATAGATCAGTGATGTTAGAACCATTTGATCTTCCTGGAATGAATGTGATTCACCAAGGAGCAGGCAAACCTCTTCTCACTGTAGATTCTTCCCAAGGGGGGCCGTCTGCTGTTTTTCTTTTGGTACCAGGATTGGATGGACGAAATGAAACCGTATCTTTAGAATCCCAGAGCAACAAGGGATGTTATGTGTACAGTGGTATGAGCCCTAGTGCAGGAGTCAAGCTCAGTTGCAAATCTGATTCTGATGCTACTTTTAACCAAGCAGCAAGCTTTGTTGCTCTGCAAGGATTGAGCCAATACAATCCTATCAGTTTTGTGGCTAAAGGGGCAAACAGGAATTTTCTTTTGCAGCCATTACTCTCATTCAGAGACGAGCATTACACAGTTTATTTCAATATTCAAGATTGA 2565 0.4218 MRMEALVFALVAILLCGCDAAKECTNIPTQSHTFRYELLMSTNATWKAEVMDHYHLTPTDETAWADLLPRKLLSEQNQHDWGVMYRKIKNMGVFKSGEGFLKEVPLQDVRLHKDSIHGRAQQTNLEYLLMLDVDSLIWSFRKTAALSTPGTPYGGWEGPEVELRGHFVGHYLSASALMWASTQNDTLKQKMSSLVAGLSACQEKIGTGYLSAFPSEFFDRFEAVQPVWAPYYTIHKILAGLLDQHTFAGNPQALKMVTWMVDYFYNRVQNVITKYTVNRHYQSMNEETGGMNDVLYRLYSITGDSKHLVLAHLFDKPCFLGLLAVQANDIADLHANTHIPIVVGSQMRYEITGDPLYKQIGTFFMDLVNSSHSYATGGTSVREFWSDPKRIADNLRTTENEESCTTYNMLKVSRHLFRWTKEVSYADYYERALTNGVLSIQRGTDPGVMIYMLPLGFAVSKARTGHSWGTQFDSFWCCYGTGIESFSKLGDSIYFEEEGKDPTLYIIQYISSSFNWKSGKILLNQTVVPASSSDPYLRVTFTFSPVENTLSTLNFRLPSWTLLDGAKGILNGQTLSLPNPGNYLSITRQWSASDKLTLQLPLTVRTEAIKDDRPEYASVQAILYGPYLLAGHTTGGDWNLKAGANNADWITPIPASYNSQLVSFFRDFEGSTFVLANSNQSVSMQKLPEFGTDLALQATFRIVLEESSSKFSKLADANDRSVMLEPFDLPGMNVIHQGAGKPLLTVDSSQGGPSAVFLLVPGLDGRNETVSLESQSNKGCYVYSGMSPSAGVKLSCKSDSDATFNQAASFVALQGLSQYNPISFVAKGANRNFLLQPLLSFRDEHYTVYFNIQD 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00497 854 Gene3D - 715 840 - -
Gma12g00497 854 PANTHER PROLINE-TRNA LIGASE (DUF1680) 8 853 - -
Gma12g00497 854 Pfam Beta-L-arabinofuranosidase, GH127 109 630 IPR012878 -
Gma12g00497 854 SUPERFAMILY AbfB domain 721 834 IPR036195 GO:0046373|GO:0046556
Gma12g00497 854 PANTHER - 8 853 - -
Gma12g00497 854 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Gma12g00497 854 SUPERFAMILY Six-hairpin glycosidases 150 440 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00497 Gma-Chr12 4124161 4130405 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00497 K09955 - gmx:100783150 1736.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00497 12 4124161 4130405 Gma12g00497 12 4124161 4130405 ECH
Gma12g00497 12 4124161 4130405 Gma11g01196 11 10190782 10196406 GST
Gma15g00312 15 2706795 2712339 Gma12g00497 12 4124161 4130405 PCT