Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00292 ATGTTGGTGGTTTCTTTGGGGCGAATCCATGTGTGTGCCAAAACAAGAACATGCTTTTCCTCAAAATTCCATCTCCTTAAACTTCATACTTTCACTCCTGCTTctgcttcagtgtcccaacttggagtctctgagagTGACAAGAAAACCAAAAAAAGCTCGCAACTTCAACACGTGCCGGAAACGGAATTTGAAGACCATAAACTTAAATTAATTATGCAGTTCCATGTATATGTAGGTGAGGCCCCTGCACATTGGGAAATGGTTCTTCAAGGAATTCGCCAAATGAGGAGTTCTGCAGATGAACACCAACCGGTTGCACGTGAGAAAGCCGCTGATACTGAAAGAAGATTTGTTGTCCTGGCATCTTCCCTTTTATCAAGCCAAACTAAGGAAAAGGTTACTCGTGTAGGAGCAACTCAAAGTCTTCGTGAAAATGGTCTGCTTAGCGCTGATGCAATGAACAAAGCTGATGAAGAAACCATCAAAAAGTTGATTTACCCTgttggattttatacgagaaaagtcagtaactTGAAGAAAATTGCCAATATTTGTCTCATGAAATATGATGGAGACATTCCTAGCTCAATTGAGGAACTACTCTTGCTGCCAGGAGTTGGTCCTAAGATTGCTCATTTGGTGC 646 0.3731 MLVVSLGRIHVCAKTRTCFSSKFHLLKLHTFTPASASVSQLGVSESDKKTKKSSQLQHVPETEFEDHKLKLIMQFHVYVGEAPAHWEMVLQGIRQMRSSADEHQPVAREKAADTERRFVVLASSLLSSQTKEKVTRVGATQSLRENGLLSADAMNKADEETIKKLIYPVGFYTRKVSNLKKIANICLMKYDGDIPSSIEELLLLPGVGPKIAHLV 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00292 215 PANTHER ENDONUCLEASE III-LIKE PROTEIN 1 83 215 - -
Gma15g00292 215 SUPERFAMILY DNA-glycosylase 113 215 IPR011257 GO:0003824|GO:0006281
Gma15g00292 215 Pfam Helix-hairpin-helix motif 189 214 IPR000445 GO:0003677
Gma15g00292 215 CDD ENDO3c 118 215 IPR003265 GO:0006284
Gma15g00292 215 PANTHER ENDONUCLEASE III HOMOLOG 2, CHLOROPLASTIC 83 215 - -
Gma15g00292 215 Pfam HhH-GPD superfamily base excision DNA repair protein 123 187 IPR003265 GO:0006284
Gma15g00292 215 Gene3D Hypothetical protein; domain 2 106 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00292 Gma-Chr15 2527365 2529348 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00292 K10773 - gmx:100805799 261.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00292 15 2527365 2529348 Gma15g00292 15 2527365 2529348 ECH
Gma13g03069 13 45044764 45049512 Gma15g00292 15 2527365 2529348 GST
Gma15g00292 15 2527365 2529348 Gma12g00476 12 3887854 3889082 PCT
Gma15g00292 15 2527365 2529348 Gma11g01174 11 9901999 9906856 PCT
Gma12g00476 12 3887854 3889082 Gma15g00292 15 2527365 2529348 PCT
Gma11g01174 11 9901999 9906856 Gma15g00292 15 2527365 2529348 PCT