Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00476 ATGAATGTTGGATGGAACAATGTTCAAGGGATATGTGTAGATACTCATGTCCACCACATTTGCAACCACCTTGGGTGGGTCTCAAGATTGGGCACTAAACAGAAAACTTCAACACCCGAAGAGACGAGGGAGGCACTGCAACGGTGGCTTCCAAAGGAAGAATGGGTTCCAATAAATCCTCTATTGGTAGGATTTGGACAACCAATTTGTACACCTCTAAGACATCGTTGTGGAGAATGCAGCATAAGTGAGTTATGCCCCTCAGCCTTGAAGGAGATCTCTTACTCAAGCCCATCTTCCAAGTCCAAAAAGTATAGAATGAACAAGAAGCTTTGA 336 0.4405 MNVGWNNVQGICVDTHVHHICNHLGWVSRLGTKQKTSTPEETREALQRWLPKEEWVPINPLLVGFGQPICTPLRHRCGECSISELCPSALKEISYSSPSSKSKKYRMNKKL 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00476 111 SMART ccc3 69 89 IPR003651 GO:0051539
Gma12g00476 111 SUPERFAMILY DNA-glycosylase 5 100 IPR011257 GO:0003824|GO:0006281
Gma12g00476 111 CDD ENDO3c 7 66 IPR003265 GO:0006284
Gma12g00476 111 Gene3D - 1 110 IPR023170 -
Gma12g00476 111 PANTHER ENDONUCLEASE III-LIKE PROTEIN 1 3 110 - -
Gma12g00476 111 PANTHER ENDONUCLEASE III HOMOLOG 2, CHLOROPLASTIC 3 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00476 Gma-Chr12 3887854 3889082 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00476 K10773 - gmx:100818398 203.371
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00476 12 3887854 3889082 Gma12g00476 12 3887854 3889082 ECH
Gma12g00476 12 3887854 3889082 Gma11g01174 11 9901999 9906856 GST
Gma13g03069 13 45044764 45049512 Gma12g00476 12 3887854 3889082 PCT
Gma15g00292 15 2527365 2529348 Gma12g00476 12 3887854 3889082 PCT
Gma12g00476 12 3887854 3889082 Gma13g03069 13 45044764 45049512 PCT
Gma12g00476 12 3887854 3889082 Gma15g00292 15 2527365 2529348 PCT