Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00226 ATGGCAGAAACAAGGGGAGGCAAATGTATTTCATTAGGCAGAGACAGTTTGAAGGATAGTTTATCACGAAAACGAAATGGCAATGATCCCTCGAACAATGAGAAATGTTGTTCCACTCAACTTATTGATGGAGATGGTGCCTTCAATGTTGCCGGGATTGAAAACTTCATGAAAGAGGTTAAATTAAGTGAGTGTGGGCTTTCCTATGCCGTGGTTTCTATTATGGGTCCACAAAGTAGTGGCAAGAGCACGCTCTTAAATAGTTTGTTTTGTACTAACTTCACAGAGATGGATGCATTTAAGGGAAGGCATGACGTGTTTGTTTTCAGGTCTCAAACAACCAGAGGAATTTGGATGGCTAGATGTGTTGGGATAGAGCCTTGTACACTTGTGATGGATTTGGAGGGTACTGATGGAAGAGAACGTGGAGAGGATGATACTACATTTGAAAAGCAGAGTGCTTTATTTGCTTTGGCTATTTCTGATATAGTGCTAATAAACATGTGGTGTCATGACATTGGTCGCGAACAAGCTGCAAATAAGCCGCTTTTAAAAACTGTGTTTCAGGTCATGATGAGATTGTTTAGTCCACGCAAAACAACAATGTTGTTTGTCATACGTGATAAGACAAAGACACCACTTGAAAATTTAGAACCTGTTTTGAGAGAAGATATTCAGAAGATATGGGATTCTGTTCCTAAACCAGATGCTCACAAAGAAACCCCATTAAGTGAATTTTTCATTGTTGAAGTTGTTGCTCTTTCTAGTTTCGAAGAAAAGGAAGAACAATTTAAGGAGCAGGTTGCCAACTTGAGGCAACGATTCTATCATTCTATTGCTCCAGGTGGGCTTGCAGGGGATCGGCGTGGAGTAGTTCCTGCTTCAGGCTTTTCTTTTAGTGCTCAAGAAATCTGGAAAATCATTAAAGAGAACAAGGATCTCGACCTTCCTGCACACAAGGTAATGGTAGCTACTGTACGATGTGAAGAAATTGCTAACGAGAAATATGACCTTTTTGCTACAAATAAGTGTGAGTTGGAAGAGGCTGTGCAATCTGGCCCTATTTCTGAATTTGGGAAAAAGCTCAATTCACTCCTTATTGCTTGTCTTTCAGAGTATGATGCTGAAGCCAACTATTTTGACGAAGGTGTGAGATCTGCAAAACAAAAGCAACTTCAAGAAAAACTGTTTCAACTTGTCCAACCAACATTCCAAATTGTGCTGGGATATATGAGGTCCGGAATTTTGGATAAGTTTAAGGAAGCATTTGACAAGGCATTGAATGGAGGGGAAGGGTTTTCTTCTGCTGCCAATAAGTGCATAGAGATTTATATGGCTCAGTTTGATGAAGGATGTGCAGATGTTGTTATTGAAATAGCAAACTGGGATACATCTAAAGTAAGGGAGAAGCTACAGCGTGATATTGATGCACATGTTGCATCTGTACGAGCTTCTAAGATGTCAGAACTTGTTTCATCATATGAGGAAAAACTGAAAGAGGCCTTGTCTGCACCTGTTGAAACTCTATTGGATGCAGCTAATAGTGATACTTGGCCATCAATAAGGAAACTTCTTAATCATGAGACTCAATCAGCTGTTTCTGGGTTCTGTGTTGAACTTATCAGATTTGATGTGGATGAACAAACAAAAAAGAGCATGATTGTGAGTTTAGATGATTATGCAAAGGGTGTGATAGAAGCCAAGGCTAGGGAAGAAGCTGGCAGAGTTCTAATCCGTATGAAGGACAGCAGGTTTTTGACATTGTTTAGTCATGATTCTGATTCAATGCCTCGTATTTGGACTGGAAAAGAAGATGTTCGAGCAATCACCAAGTCTGCCCGCTCTTCGTGCTTAAAGTTGCTGTCTGTAATGGCTGTAATTCGCTTGGATGATGGTGATGACATTTATGATATTGAGAAAACATTAATAGTTGCATTAGCTGATTCATCAAGCAGTTCTGCTGAAGATAAGAGCATGACGGCAGTTAAGCCACTAGCTTCAAGCACTTGGGATCAGGTACCGCCCTCTAAAACATTGATCACACCCGTCCAGTGTAAATCCTTGTGGAGGCAATTCAAGATGGAGACAGAATATTGTGTCTCTCAGGCCATTTCTGCACAG 2121 0.405 MAETRGGKCISLGRDSLKDSLSRKRNGNDPSNNEKCCSTQLIDGDGAFNVAGIENFMKEVKLSECGLSYAVVSIMGPQSSGKSTLLNSLFCTNFTEMDAFKGRHDVFVFRSQTTRGIWMARCVGIEPCTLVMDLEGTDGRERGEDDTTFEKQSALFALAISDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTMLFVIRDKTKTPLENLEPVLREDIQKIWDSVPKPDAHKETPLSEFFIVEVVALSSFEEKEEQFKEQVANLRQRFYHSIAPGGLAGDRRGVVPASGFSFSAQEIWKIIKENKDLDLPAHKVMVATVRCEEIANEKYDLFATNKCELEEAVQSGPISEFGKKLNSLLIACLSEYDAEANYFDEGVRSAKQKQLQEKLFQLVQPTFQIVLGYMRSGILDKFKEAFDKALNGGEGFSSAANKCIEIYMAQFDEGCADVVIEIANWDTSKVREKLQRDIDAHVASVRASKMSELVSSYEEKLKEALSAPVETLLDAANSDTWPSIRKLLNHETQSAVSGFCVELIRFDVDEQTKKSMIVSLDDYAKGVIEAKAREEAGRVLIRMKDSRFLTLFSHDSDSMPRIWTGKEDVRAITKSARSSCLKLLSVMAVIRLDDGDDIYDIEKTLIVALADSSSSSAEDKSMTAVKPLASSTWDQVPPSKTLITPVQCKSLWRQFKMETEYCVSQAISAQ 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00226 707 Coils Coil 254 274 - -
Gma15g00226 707 PANTHER PROTEIN SEY1 22 699 IPR008803 -
Gma15g00226 707 CDD GBP 65 278 - -
Gma15g00226 707 Pfam Sey1 three-helix bundle domain 357 703 IPR046758 -
Gma15g00226 707 ProSiteProfiles GB1/RHD3-type guanine nucleotide-binding (G) domain profile. 66 288 IPR030386 GO:0005525
Gma15g00226 707 Gene3D - 48 289 IPR027417 -
Gma15g00226 707 Pfam Root hair defective 3 GTP-binding protein (RHD3) GTPase domain 75 317 - -
Gma15g00226 707 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 40 284 IPR027417 -
Gma15g00226 707 PANTHER PROTEIN ROOT HAIR DEFECTIVE 3 HOMOLOG 22 699 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00226 Gma-Chr15 1974396 1981455 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00226 K22698 - gmx:100797516 1278.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g03140 13 45547513 45555688 Gma15g00226 15 1974396 1981455 GST
Gma15g00226 15 1974396 1981455 Gma07g00094 07 766749 777247 PCT
Gma15g00226 15 1974396 1981455 Gma08g01783 08 15869709 15877946 PCT
Gma07g00094 07 766749 777247 Gma15g00226 15 1974396 1981455 PCT
Gma08g01783 08 15869709 15877946 Gma15g00226 15 1974396 1981455 PCT