Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01783 ATGGCAAATAGTGAGACTTGTTGTTCAACTCAGCTTATTGATGGAGATGGTACATTCAATGTTTCTGGGCTTGAAAGTTTCATGAAGGAGGTGAAGTTGGCTGAATGTGGGCTTTCGTATGCCGTAGTTTCTATAATGGGTCCACAAAGTAGTGGCAAGAGCACGCTATTAAATAATTTGTTTGGTACCAACTTCAGAGAGATGGATGCTTTTAAGGGAAGGTCTCAAACAACCAAAGGAATCTGGATGGCTAGATGTGCTGACATAGAGCCTTGTACACTTGTGATGGATTTGGAGGGTACAGATGGAAGAGAACGTGGAGAGGATGACACTGCTTTTGAAAAGCAGAGTGCTCTATTTGCTCTTGCTGTCTCAGATATAGTGCTAATAAACATGTGGTGCCATGACATTGGCCGTGAGCAAGCTGCAAATAAGCCACTTTTGAAAACTGTTTTTCAGGTCATGATGAGATTGTTTAGTCCACGAAAAACAACGTTGCTGTTTGTCATACGTGATAAAACAAGGACACCACTTGAAAATTTAGAACCTGTTTTGCGAGAAGATATTCAGAAGATATGGGATTCTGTTCCTAAACCACAGGCCCACAAGGAAACCCCATTAAGTGAATTTTTCAATGTTGAAGTTGTTGCTCTTTCTAGTTATGAAGAAAAGGAAGAGCAGTTTAAAGAGCAGGTTGCCAGCTTGCAGAAACGATTCCATCATTCTATCGCTCCTGGTGGGCTTGCAGGGGATCGGCGTGGAGTTGTTCCTGCTTCTGGCTTTTCTTTTAGTTCTGAGCATATATGGAAAGTCATTAAGGAGAACAAAGATCTTGACCTTCCTGCACATAAGGTTATGGTTGCAACTGTACGATGTGAAGAAATCGCAAATGAGAAATATGCCTCTTTTGTTGCAAATGAGGATTGGTGTCAATTGGAAGAGGCTGTGCAATCTGGTCCTATTCCTGGATTTGGGAAAAAGCTCAGTTCACTCCTTGATACTTGTTTTTCAGAGTATGATGCTGAAGCCACCTATTTTGATGAAGGTGTGAGATCTTCCAAACAAAAGCAACTACAAGAAAAATTGTTCCAACTTGTCCAACCAGCATTCCAATCTGCGCTGGGACATATAAGATCTGGAACTTTGGATAAATTCAAGGAGGCATTTGACAAGGCTTTGAAGGGAGGGGAAGGGTTTTCTGTGGCTGCTAATAATTGCATCGGGTCTGGTCTGGTTCAGTTTGATGAAGCATGTACAGATGTTGTTATTGAACAAACAAACTGGGATACATCTAAAGTACGAGAGAAACTGCTGCGTGATATTGATGCATATGTTGCAACTGTACGTGCAACCAAGATTTCTGAACTTACTTCATCATATGAGGAAAAACTTAAACAAGCTTTGTCTGGACCTGTTGAAGCTCTTTTGGATGGAGCTAATAGAGATACTTGGCCATCAATAAGGAATCTTCTTAGGCGTGAGACTGAATCAGCTGTTTCAGGGTTCTCTGCTGCACTTACTGGGTTTGATATGGATGAAGAAACAAGGCAGAAAATGATTTTGAGTTTAGAGGCTTATGCAAGGGGTCTGGTAGAAGGAAAGGCTAGGGAAGAAGCTGGAAGAGTTCTAATGCGCATGAAGGACAGCAGGTTTACAATGTTGTTTAGCCATGATTCTGATTCAATGCCTCGTGTTTGGACGGGGAAAGAAGATATACGAGCCATCACCAAGACTGCTCGCTCTTCTTCTTTGAAGTTGCTATCTGTTATGGCTGCAATTCGTTTGGATGATGATGACACTGACAATATTGAGAAAGTGTTAGCAGTTGCCTTGGTGGATTCGTCACCAAGCAGTAATGCTACAAGGAGCATCACAATGGTTGATCCACTAGCTTCTAGCAGCTGGGAACAGGTTTCATCCTCTAAAACATTGATTACACCTGTCCAGTGCAAGTCTTTGTGGAGGCAATTCAAGACAGAGACAGAGTACAGTGTCTCTCAGGCCATTTCTGCACAGGAGGCCAACAAGCGCAACAACAACTGGTTACCTCCCCCATGGGCAATAGTTGCTTTGGTTATTCTGGGATTTAATGAATTTATGACACTTCTAAGAAATCCCTTGTATTTGGGTGTAATCTTTGTTGGTTTTCTTCTCATTAAAGCCCTATGGGTGCAGCTTGATGTTTCGGGTGAATTTCGCAATGGAGCTCTTCCAGGAATCATATCCTTGTCTAGCAAGTTTATTCCAACTATCATGAACCTTATGAGAAAACTAGCAGAGGAGGGACAAAACCCTGCAGCTAACAATCCTCAGAGAACCCCATCAAAAAACAGTTACAATGATGGTCATGCTGTGTCATCTAGCGCCTCATCTAACTTGACTGCATTGGACAACGGAACTGAGTATGCAAGTCCATTAAAAGATGAGTAG 2430 0.421 MANSETCCSTQLIDGDGTFNVSGLESFMKEVKLAECGLSYAVVSIMGPQSSGKSTLLNNLFGTNFREMDAFKGRSQTTKGIWMARCADIEPCTLVMDLEGTDGRERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLLFVIRDKTRTPLENLEPVLREDIQKIWDSVPKPQAHKETPLSEFFNVEVVALSSYEEKEEQFKEQVASLQKRFHHSIAPGGLAGDRRGVVPASGFSFSSEHIWKVIKENKDLDLPAHKVMVATVRCEEIANEKYASFVANEDWCQLEEAVQSGPIPGFGKKLSSLLDTCFSEYDAEATYFDEGVRSSKQKQLQEKLFQLVQPAFQSALGHIRSGTLDKFKEAFDKALKGGEGFSVAANNCIGSGLVQFDEACTDVVIEQTNWDTSKVREKLLRDIDAYVATVRATKISELTSSYEEKLKQALSGPVEALLDGANRDTWPSIRNLLRRETESAVSGFSAALTGFDMDEETRQKMILSLEAYARGLVEGKAREEAGRVLMRMKDSRFTMLFSHDSDSMPRVWTGKEDIRAITKTARSSSLKLLSVMAAIRLDDDDTDNIEKVLAVALVDSSPSSNATRSITMVDPLASSSWEQVSSSKTLITPVQCKSLWRQFKTETEYSVSQAISAQEANKRNNNWLPPPWAIVALVILGFNEFMTLLRNPLYLGVIFVGFLLIKALWVQLDVSGEFRNGALPGIISLSSKFIPTIMNLMRKLAEEGQNPAANNPQRTPSKNSYNDGHAVSSSASSNLTALDNGTEYASPLKDE 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01783 809 Pfam Sey1 three-helix bundle domain 323 761 IPR046758 -
Gma08g01783 809 Coils Coil 218 238 - -
Gma08g01783 809 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 274 IPR027417 -
Gma08g01783 809 MobiDBLite consensus disorder prediction 763 809 - -
Gma08g01783 809 Gene3D - 14 245 IPR027417 -
Gma08g01783 809 Pfam Root hair defective 3 GTP-binding protein (RHD3) GTPase domain 46 281 - -
Gma08g01783 809 Hamap Protein SEY1 [SEY1]. 9 763 IPR008803 -
Gma08g01783 809 ProSiteProfiles GB1/RHD3-type guanine nucleotide-binding (G) domain profile. 37 252 IPR030386 GO:0005525
Gma08g01783 809 MobiDBLite consensus disorder prediction 764 799 - -
Gma08g01783 809 CDD GBP 36 219 - -
Gma08g01783 809 PANTHER PROTEIN SEY1 3 802 IPR008803 -
Gma08g01783 809 PANTHER PROTEIN ROOT HAIR DEFECTIVE 3 HOMOLOG 3 802 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01783 Gma-Chr8 15869709 15877946 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01783 K22698 - gmx:100780006 1579.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00094 07 766749 777247 Gma08g01783 08 15869709 15877946 GST
Gma13g03140 13 45547513 45555688 Gma08g01783 08 15869709 15877946 PCT
Gma15g00226 15 1974396 1981455 Gma08g01783 08 15869709 15877946 PCT
Gma08g01783 08 15869709 15877946 Gma13g03140 13 45547513 45555688 PCT
Gma08g01783 08 15869709 15877946 Gma15g00226 15 1974396 1981455 PCT