Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00094 ATGGCAAATAGTGAGACTTGTTGTTCAACTCAGCTTATTGATGGAGATGGTACATTCAATGTTTTTGGGGTTGAAAATTTCATGAAGGAGGTGAAGTTGGCTGAATGTGGGCTTTCATATGCCGTAGTTTCTATAATGGGTCCTCAAAGTAGTGGCAAGAGCACACTGTTAAATCATTTGTTTGGTACCAACTTCAGAGAGATGGATGCTTTTAAGGGAAGGTCTCAAACAACCAAAGGAATCTGGATGGCTAGATGTGCTGGCATAGAGCCTTGTACACTTGTGATGGATTTGGAGGGTACAGATGGAAGAGAACGCGGAGAGGATGACACTGCTTTTGAAAAGCAGAGTGCTCTATTTGCTCTTGCTGTCTCAGATATAGTGCTAATAAACATGTGGTGCCATGACATTGGCCGTGAGCAAGCTGCAAATAAGCCACTTTTGAAAACTGTCTTTCAGGTCATGATGAGATTGTTTAGTCCACGAAAAACAACATTGTTGTTTGTCATACGCGATAAAACAAGGACACCACTTGAAAATTTAGAACCTGTTTTGCGAGAAGATATTCAGAAGATATGGGACTCTGTTCCTAAACCACAGGCCCACAAGGAAACCCCATTAAGTGAATTTTTCAATGTTGAAGTTGTTGCTCTTTCTAGTTATGAAGAAAAGGAAGAGCAATTTAAAGATCAGGTTGCTAGCTTGCGGCAACGGTTCCATCATTCTATCGCTCCTGGTGGGCTTGCAGGGGATCGGCGTGGAGTAGTTCCTGCTTCTGGCTTTTCTTTTAGTTCTGAGCATATATGGAAAGTCATTAAGGAGAACAAAGATCTCGATCTTCCTGCACATAAGGTTATGGTTGCTACTGTACGATGTGAAGAAATAGCCAACGAGAAATATGTTTCTTTTGTTGCAAATGAGGATTGGTGTCAATTGGAAGAGGCTGTGCAATCTGGCCCTATTCCTGGATTTGGGAAAAAGCTCAGTTCACTTCTTGATATTTGTTTTTCAGAGTATGATGCTGAAGCCACCTATTTTGACGAAGGTGTGAGATCTTCCAAACAAAAGCAACTACAAGAAAAATTGTTCCAACTTGTCCAACCAGCATTCCAATCTGCGCTGGGACATATAAGATCTGGAACTTTGGATAAATTCAAGGAGGCATTTGACAAGACTTTGAAAGGAGGGGAAGGATTTTCTGTGGCTGCTAATAATTGCATTGGGTCTTGTATGGTTCAATTTGATGAAGCATGCACAGATGTTGTTATTGAACAAACAAACTGGGATACATCTAAAGTACGAGAGAAACTGCTGCGTGATATTGATGCACATGTTGCAACTGTACGTGCAACCAAGATTTCTGAACTTACTTCATCATATGAGGAAAAACTTAAACAAGCTTTGTCTGGACCTGTTGAAGCTCTTTTGGACGGAGCTAATAGTGATACTTGGCCATCAATAAGGAATCTTTTTAGGCGTGAGACTGAATCAGCTGTTTCAGGGTTCTCTGCTGCACTTACTGGGTTTGATATGGATGAAGAAACAAGGCAGAAAATAATTTTGAGTTTAGAGGATTATGCAAGGGGTCTGGTAGAAGGAAAGGCTCGGGAAGAAGCTGGAAGAGTTCTAATCCGCATGAAAGACAGGTTTACGATGTTGTTTAGCCATGATTCTGATTCAATGCCTCGTGTTTGGACGGGTAAAGAAGATATACGAGCCATCACCAAGACTGCTCGCTCTTCTTCTTTGAAGTTGCTATCTGTTATGGCTGCAATTCGTTTGGATGATGATGACACTGACAATATTGAGAAGGTGTTAGCAGTTGCATTGGTGGATTCATCACCAAATAGTAATGCTACAAGGAGCATGACAATGGTTGATCCACTAGCTTCTAGCAGCTGGGAACAGGTTTCATCCTCTAAAACATTGATTACACCTGTCCAGTGCAAGTCTTTGTGGAGGCAATTCAAGACAGAGACAGAGTACAGTGTCTCTCAGGCCATTTCTGCACAGGAGGCCAACAAGCGCAACAACAACTGGTTACCTCCCCCATGGGCAATAGTTGCTTTGGTTATCCTGGGATTTAATGAATTTATGACACTTCTAAGAAATCCCTTGTATTTGGGTGTCATCTTTGTTGGTTTTCTTCTCATTAAAGCCCTATGGGTGCAGCTTGATGTTTCGGGTGAATTTCGCAATGGAGCTCTTCCAGGAATCATATCCTTGTCTAGCAAGTTTATTCCAACTATCATGAACCTTATGAAAAAACTAGCAGAGGAGGGACAGAACCCTGCAGCTAACAATCCTCAGAGAACCCCATCAAAAAGCAGTTACAATGAGGGTCATGCCGTGTCATCTAGCGCCTCATCTAACTTGACTAGATTGGACAACGGAACCGAGTATGCGAGTCCATTAAAAGATGATTAG 2427 0.4186 MANSETCCSTQLIDGDGTFNVFGVENFMKEVKLAECGLSYAVVSIMGPQSSGKSTLLNHLFGTNFREMDAFKGRSQTTKGIWMARCAGIEPCTLVMDLEGTDGRERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLLFVIRDKTRTPLENLEPVLREDIQKIWDSVPKPQAHKETPLSEFFNVEVVALSSYEEKEEQFKDQVASLRQRFHHSIAPGGLAGDRRGVVPASGFSFSSEHIWKVIKENKDLDLPAHKVMVATVRCEEIANEKYVSFVANEDWCQLEEAVQSGPIPGFGKKLSSLLDICFSEYDAEATYFDEGVRSSKQKQLQEKLFQLVQPAFQSALGHIRSGTLDKFKEAFDKTLKGGEGFSVAANNCIGSCMVQFDEACTDVVIEQTNWDTSKVREKLLRDIDAHVATVRATKISELTSSYEEKLKQALSGPVEALLDGANSDTWPSIRNLFRRETESAVSGFSAALTGFDMDEETRQKIILSLEDYARGLVEGKAREEAGRVLIRMKDRFTMLFSHDSDSMPRVWTGKEDIRAITKTARSSSLKLLSVMAAIRLDDDDTDNIEKVLAVALVDSSPNSNATRSMTMVDPLASSSWEQVSSSKTLITPVQCKSLWRQFKTETEYSVSQAISAQEANKRNNNWLPPPWAIVALVILGFNEFMTLLRNPLYLGVIFVGFLLIKALWVQLDVSGEFRNGALPGIISLSSKFIPTIMNLMKKLAEEGQNPAANNPQRTPSKSSYNEGHAVSSSASSNLTRLDNGTEYASPLKDD 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00094 808 Pfam Root hair defective 3 GTP-binding protein (RHD3) GTPase domain 46 281 - -
Gma07g00094 808 Gene3D - 24 245 IPR027417 -
Gma07g00094 808 CDD GBP 36 239 - -
Gma07g00094 808 Coils Coil 218 238 - -
Gma07g00094 808 Pfam Sey1 three-helix bundle domain 323 760 IPR046758 -
Gma07g00094 808 ProSiteProfiles GB1/RHD3-type guanine nucleotide-binding (G) domain profile. 37 252 IPR030386 GO:0005525
Gma07g00094 808 MobiDBLite consensus disorder prediction 763 798 - -
Gma07g00094 808 MobiDBLite consensus disorder prediction 761 808 - -
Gma07g00094 808 PANTHER PROTEIN ROOT HAIR DEFECTIVE 3 HOMOLOG 3 806 - -
Gma07g00094 808 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 249 IPR027417 -
Gma07g00094 808 Hamap Protein SEY1 [SEY1]. 9 765 IPR008803 -
Gma07g00094 808 PANTHER PROTEIN SEY1 3 806 IPR008803 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00094 Gma-Chr7 766749 777247 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00094 K22698 - gmx:100777656 1590.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00094 07 766749 777247 Gma08g01783 08 15869709 15877946 GST
Gma13g03140 13 45547513 45555688 Gma07g00094 07 766749 777247 PCT
Gma15g00226 15 1974396 1981455 Gma07g00094 07 766749 777247 PCT
Gma07g00094 07 766749 777247 Gma13g03140 13 45547513 45555688 PCT
Gma07g00094 07 766749 777247 Gma15g00226 15 1974396 1981455 PCT