Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00222 ATGGTTATTTGCTTGAAGCTCATAATAATGTGGAATGTGGCACTGCTTCTGGTTTTTTCTCTAATTGGTTCTGCTAAGGCCTCAGTGTCCTATGACTCAAAGGCTATCACCATTAATGGCCAGAGAAGGATCCTCATTTCTGGATCCATTCATTACCCAAGGAGCACCCCTGAGATGTGGCCAGATCTTATTCAAAAGGCCAAGGACGGAGGTTTGGATGTGATTCAGACTTATGTTTTCTGGAATGGACACGAACCTTCACCTGGCAAGTATTATTTTGAGGGGAACTATGATCTGGTGAAGTTCATAAAGCTGGTGCAGCAAGCAGGCCTTTATGTTCATCTCAGGATTGGCCCTTATGTCTGTGCTGAGTGGAACTTTGGTGGTTTCCCTGTTTGGCTAAAGTACATTCCAGGAATCAGTTTCAGAACAGACAATGAACCATTTAAGCATCAAATGCAAAAATTTACCACGAAGATTGTTGATTTGATGAAAGCGGAGAGGTTATATGAATCTCAGGGTGGTCCAATAATTATGTCCCAGATTGAAAATGAATATGGACCTATGGAGTATGAAATTGGTGCTGCTGGTAAAGCTTACACTAAGTGGGCAGCAGAAATGGCTCTGGGACTTGGTACTGGGGTTCCATGGGTCATGTGCAAGCAAGATGACACTCCTGATCCTCTTATTAACACTTGCAATGGCTTCTATTGTGATTATTTCTCTCCAAATAAGGCTTACAAGCCAAAGATGTGGACAGAAGCTTGGACTGGCTGGTTTACTGAGTTTGGAGGTCCTGTTCCTCATCGACCGGCTGAAGACTTGGCATTTTCAGTTGCAAGGTTTATACAGAAAGGGGGATCATTTATAAATTATTACATGTATCATGGAGGAACAAATTTCGGTCGAACTGCTGGTGGTCCCTTTATTGCTACAAGCTATGATTATGATGCACCACTTGATGAATATGGATTGCTCAGGCAACCAAAGTGGGGTCATCTGAAGGATTTACACAGAGCAATAAAACTCTGTGAACCAGCTTTAGTATCTGGAGATCCTACTGTAACAAAGATTGGAAACTATCAAGAGGCTCATGTCTTTAAATCAAAGTCGGGAGCCTGTGCTGCATTCCTTGCAAACTACAACCCCAAATCTTATGCAACAGTGGCATTTGGAAACATGCATTACAACTTGCCTCCTTGGTCTATAAGCATTCTTCCTGACTGCAAGAACACTGTTTATAACACTGCAAGGGTTGGTTCTCAGAGTGCCCAGATGAAGATGACTCGTGTTCCTATTCATGGCGGATTCTCTTGGCTATCATTCAATGAAGAAACGACCACTACTGATGATAGTTCCTTCACCATGACTGGCCTGTTGGAGCAGTTAAATACTACAAGAGATTTATCTGACTACTTGTGGTACTCCACAGATGTTGTGCTTGATCCCAATGAAGGATTTCTGAGAAACGGAAAGGATCCTGTTCTTACTGTGTTTTCTGCTGGGCATGCTTTGCATGTTTTTATAAATGGTCAGCTATCAGGAACTGCATATGGAAGCTTAGAATTCCCTAAACTGACATTTAACGAGGGAGTGAAGCTTAGAGCCGGTGTTAACAAGATCTCTCTACTGAGTGTTGCAGTTGGACTCCCGAATGTTGGTCCTCATTTTGAAACATGGAATGCTGGTGTTCTTGGTCCAATTTCATTAAGTGGTCTCAACGAAGGGAGAAGGGACTTGTCTTGGCAGAAATGGTCTTATAAGGTTGGTCTTAAAGGTGAAATCTTGAGTCTTCACTCTCTTAGTGGAAGTTCCTCAGTGGAGTGGATTCAGGGATCTTTAGTTTCTCAAAGGCAGCCATTGACTTGGTACAAAACAACATTTGACGCGCCAGCTGGGACTGCACCATTGGCTTTAGACATGGACAGCATGGGCAAAGGTCAAGTGTGGTTAAATGGACAGAATCTTGGCCGCTACTGGCCTGCTTATAAAGCATCCGGTACCTGTGATTACTGTGACTATGCTGGAACTTATAACGAGAATAAATGCAGAAGTAACTGTGGCGAGGCTTCCCAAAGATGGTATCATGTTCCTCAATCATGGCTTAAGCCAACAGGAAATTTATTGGTTGTGTTTGAAGAGCTAGGTGGAGACCCCAATGGAATCTTTTTGGTTAGAAGGGATATAGATAGTGTATGTGCTGATATTTATGAGTGGCAGCCAAATCTTATAAGCTATCAGATGCAAACTTCTGGCAAAGCACCTGTTAGACCAAAAGTTCATTTATCATGTAGCCTGGGACAGAAAATCTCATCAATCAAATTTGCTAGCTTTGGTACTCCAGCAGGTTCTTGTGGAAACTTCCATGAAGGAAGCTGTCATGCTCACAAGTCTTATGATGCCTTTGAAAGGAATTGTGTTGGACAGAACTGGTGCACAGTAACAGTGTCACCTGAAAATTTTGGAGGAGATCCATGTCCAAATGTCTTGAAGAAACTCTCAGTGGAAGCTATTTGTTCCTGA 2523 0.4261 MVICLKLIIMWNVALLLVFSLIGSAKASVSYDSKAITINGQRRILISGSIHYPRSTPEMWPDLIQKAKDGGLDVIQTYVFWNGHEPSPGKYYFEGNYDLVKFIKLVQQAGLYVHLRIGPYVCAEWNFGGFPVWLKYIPGISFRTDNEPFKHQMQKFTTKIVDLMKAERLYESQGGPIIMSQIENEYGPMEYEIGAAGKAYTKWAAEMALGLGTGVPWVMCKQDDTPDPLINTCNGFYCDYFSPNKAYKPKMWTEAWTGWFTEFGGPVPHRPAEDLAFSVARFIQKGGSFINYYMYHGGTNFGRTAGGPFIATSYDYDAPLDEYGLLRQPKWGHLKDLHRAIKLCEPALVSGDPTVTKIGNYQEAHVFKSKSGACAAFLANYNPKSYATVAFGNMHYNLPPWSISILPDCKNTVYNTARVGSQSAQMKMTRVPIHGGFSWLSFNEETTTTDDSSFTMTGLLEQLNTTRDLSDYLWYSTDVVLDPNEGFLRNGKDPVLTVFSAGHALHVFINGQLSGTAYGSLEFPKLTFNEGVKLRAGVNKISLLSVAVGLPNVGPHFETWNAGVLGPISLSGLNEGRRDLSWQKWSYKVGLKGEILSLHSLSGSSSVEWIQGSLVSQRQPLTWYKTTFDAPAGTAPLALDMDSMGKGQVWLNGQNLGRYWPAYKASGTCDYCDYAGTYNENKCRSNCGEASQRWYHVPQSWLKPTGNLLVVFEELGGDPNGIFLVRRDIDSVCADIYEWQPNLISYQMQTSGKAPVRPKVHLSCSLGQKISSIKFASFGTPAGSCGNFHEGSCHAHKSYDAFERNCVGQNWCTVTVSPENFGGDPCPNVLKKLSVEAICS 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00222 840 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 174 186 IPR019801 GO:0004553|GO:0005975
Gma15g00222 840 Gene3D - 598 733 - -
Gma15g00222 840 PANTHER BETA-GALACTOSIDASE 11 834 - -
Gma15g00222 840 SUPERFAMILY (Trans)glycosidases 29 345 IPR017853 -
Gma15g00222 840 Gene3D - 744 840 IPR043159 -
Gma15g00222 840 SUPERFAMILY Galactose-binding domain-like 403 574 IPR008979 -
Gma15g00222 840 PRINTS Glycosyl hydrolase family 35 signature 39 56 IPR001944 GO:0004553|GO:0005975
Gma15g00222 840 PRINTS Glycosyl hydrolase family 35 signature 60 78 IPR001944 GO:0004553|GO:0005975
Gma15g00222 840 PRINTS Glycosyl hydrolase family 35 signature 115 134 IPR001944 GO:0004553|GO:0005975
Gma15g00222 840 PRINTS Glycosyl hydrolase family 35 signature 172 187 IPR001944 GO:0004553|GO:0005975
Gma15g00222 840 PRINTS Glycosyl hydrolase family 35 signature 251 266 IPR001944 GO:0004553|GO:0005975
Gma15g00222 840 PRINTS Glycosyl hydrolase family 35 signature 288 303 IPR001944 GO:0004553|GO:0005975
Gma15g00222 840 PRINTS Glycosyl hydrolase family 35 signature 308 324 IPR001944 GO:0004553|GO:0005975
Gma15g00222 840 PRINTS Glycosyl hydrolase family 35 signature 619 633 IPR001944 GO:0004553|GO:0005975
Gma15g00222 840 PRINTS Glycosyl hydrolase family 35 signature 646 662 IPR001944 GO:0004553|GO:0005975
Gma15g00222 840 Pfam Beta-sandwich domain in beta galactosidase 348 419 IPR041392 -
Gma15g00222 840 PANTHER BETA-GALACTOSIDASE RELATED 11 834 IPR001944 GO:0004553|GO:0005975
Gma15g00222 840 SUPERFAMILY Galactose-binding domain-like 583 748 IPR008979 -
Gma15g00222 840 Gene3D Glycosidases 25 345 - -
Gma15g00222 840 ProSiteProfiles SUEL-type lectin domain profile. 754 840 IPR000922 GO:0030246
Gma15g00222 840 Pfam Galactose binding lectin domain 762 839 IPR000922 GO:0030246
Gma15g00222 840 Pfam Glycosyl hydrolases family 35 36 340 IPR031330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00222 Gma-Chr15 1955558 1961319 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00222 14 840 Glycoside Hydrolase AT3G13750 80.820 0.0 1432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00222 - - gmx:100811187 1753.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00222 15 1955558 1961319 Gma15g00222 15 1955558 1961319 ECH
Gma13g03143 13 45567732 45573839 Gma15g00222 15 1955558 1961319 GST
Gma15g00222 15 1955558 1961319 Gma07g00096 07 797897 804411 PCT
Gma15g00222 15 1955558 1961319 Gma08g01786 08 15898383 15904271 PCT
Gma07g00096 07 797897 804411 Gma15g00222 15 1955558 1961319 PCT
Gma08g01786 08 15898383 15904271 Gma15g00222 15 1955558 1961319 PCT