Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01786 ATGAGCTTCAACAAGCTCAAAGTGTGGAATGTGCCACTACTCTTGGTGGTGTTTGCATGTTCACTGCTTGGTCAAGCTTCAGCTTCTGTGTCCTATGACCATAAGGCTATCATCATCAATGGACAGAGAAGGATACTTCTTTCTGGCTCCATTCACTACCCCAGAAGCACCCCTGAGATGTGGCCAGATCTTATTCAGAAGGCAAAGGAAGGAGGTTTGGATGTCATTCAAACTTATGTTTTCTGGAATGGACATGAACCTTCACCTGGCAAATATTATTTTGGAGGAAACTATGATCTGGTGAGGTTCATAAAGCTAGTGCAGCAAGCAGGCCTCTATGTTAACCTCAGAATTGGTCCTTATGTTTGTGCTGAATGGAACTTCGGAGGATTCCCTGTTTGGCTCAAGTACATTCCAGGTATCAGCTTCAGAACAGACAATGGACCATTTAAGTTTCAAATGGAAAAGTTTACCAAGAAGATTGTGGATATGATGAAAGCAGAAAGGTTATTTGAGTCTCAGGGCGGTCCAATAATTCTGTCCCAGATTGAAAATGAATACGGACCTATGGAGTATGAAATTGGTGCTCCTGGTAGATCCTACACTCAATGGGCAGCACATATGGCTGTAGGACTTGGCACCGGGGTTCCATGGATCATGTGCAAGCAAGATGATGCTCCTGATCCTATTATTAACACTTGCAATGGCTTCTATTGTGATTATTTCTCTCCAAATAAGGCTTACAAACCAAAGATGTGGACAGAGGCTTGGACTGGCTGGTTTACTGAGTTTGGAGGTGCAGTTCCTCACAGACCTGCTGAGGACTTGGCATTTTCAATTGCAAGGTTTATACAGAAAGGGGGATCATTTGTCAATTATTATATGTATCATGGCGGAACAAATTTTGGTCGAACTGCTGGTGGCCCCTTTATTGCTACGAGCTATGATTACGATGCGCCCCTTGATGAATATGGATTGGCCAGACAGCCAAAGTGGGGTCATCTGAAGGATTTACATAGAGCAATAAAACTCTGTGAACCTGCTTTAGTATCTGGAGATTCTACTGTACAACGGCTTGGAAACTATGAAGAGGCTCATGTTTTTAGATCCAAGTCTGGAGCTTGTGCTGCATTCCTTGCGAACTATAACCCACAATCTTATGCAACAGTGGCATTTGGAAATCAGCATTACAACTTGCCTCCTTGGTCTATAAGCATTCTTCCTAACTGCAAGCACACTGTTTATAACACTGCAAGGGTTGGTTCTCAGAGCACAACAATGAAGATGACTCGTGTTCCTATTCATGGAGGACTATCTTGGAAAGCGTTTAATGAAGAAACAACCACTACTGATGATAGTTCGTTCACTGTGACTGGCTTGTTGGAGCAGATAAATGCAACCAGAGATTTATCTGATTACTTGTGGTACTCCACAGATGTTGTGATCAATTCCAATGAAGGATTTTTGAGGAATGGAAAGAATCCTGTTCTTACAGTTTTGTCTGCTGGGCATGCTTTGCATGTTTTTATCAACAATCAGCTGTCAGGAACTGCATATGGAAGCTTAGAGGCCCCCAAACTAACCTTTAGCGAAAGTGTGAGGCTCAGAGCTGGTGTTAACAAAATCTCTCTTCTAAGTGTTGCAGTTGGGCTTCCGAATGTTGGTCCACATTTTGAAAGATGGAATGCTGGTGTTCTAGGCCCAATTACATTAAGTGGTCTCAATGAGGGTAGGAGGGACTTAACTTGGCAGAAGTGGTCATACAAGGTTGGTCTTAAAGGTGAAGCCTTGAATCTTCATTCTCTTAGTGGAAGTTCCTCTGTTGAGTGGCTTCAGGGGTTTTTAGTTTCCAGAAGACAGCCATTGACTTGGTACAAAACTACCTTTGATGCCCCAGCTGGAGTTGCACCGTTGGCTTTAGACATGGGCAGCATGGGCAAAGGTCAAGTGTGGATAAATGGGCAAAGCCTAGGCCGCTACTGGCCTGCTTACAAAGCATCCGGTTCTTGTGGTTACTGTAACTATGCTGGAACTTACAATGAGAAGAAATGTGGAAGTAACTGTGGCGAGGCTTCTCAACGATGGTATCATGTTCCTCACTCATGGCTGAAGCCAAGTGGAAATTTATTGGTTGTGTTTGAGGAATTGGGTGGGGATCCGAACGGGATCTTTTTGGTTAGAAGGGATATAGATAGTGTATGTGCTGACATCTATGAGTGGCAGCCAAATCTTGTAAGTTATGAGATGCAAGCTTCTGGCAAAGTCAGAAGTCCTGTGAGACCAAAAGCACATTTGTCATGTGGACCTGGACAAAAAATATCATCAATCAAGTTTGCTAGCTTTGGCACTCCAGTAGGGTCTTGTGGAAGCTACCGCGAAGGAAGTTGTCATGCTCACAAGTCATATGATGCTTTCCTAAAGAATTGTGTTGGCCAGAGCTGGTGCACAGTGACAGTGTCTCCTGAAATTTTTGGAGGAGATCCTTGTCCAAGAGTCATGAAGAAACTCTCTGTGGAGGCCATTTGCACCTGA 2532 0.4372 MSFNKLKVWNVPLLLVVFACSLLGQASASVSYDHKAIIINGQRRILLSGSIHYPRSTPEMWPDLIQKAKEGGLDVIQTYVFWNGHEPSPGKYYFGGNYDLVRFIKLVQQAGLYVNLRIGPYVCAEWNFGGFPVWLKYIPGISFRTDNGPFKFQMEKFTKKIVDMMKAERLFESQGGPIILSQIENEYGPMEYEIGAPGRSYTQWAAHMAVGLGTGVPWIMCKQDDAPDPIINTCNGFYCDYFSPNKAYKPKMWTEAWTGWFTEFGGAVPHRPAEDLAFSIARFIQKGGSFVNYYMYHGGTNFGRTAGGPFIATSYDYDAPLDEYGLARQPKWGHLKDLHRAIKLCEPALVSGDSTVQRLGNYEEAHVFRSKSGACAAFLANYNPQSYATVAFGNQHYNLPPWSISILPNCKHTVYNTARVGSQSTTMKMTRVPIHGGLSWKAFNEETTTTDDSSFTVTGLLEQINATRDLSDYLWYSTDVVINSNEGFLRNGKNPVLTVLSAGHALHVFINNQLSGTAYGSLEAPKLTFSESVRLRAGVNKISLLSVAVGLPNVGPHFERWNAGVLGPITLSGLNEGRRDLTWQKWSYKVGLKGEALNLHSLSGSSSVEWLQGFLVSRRQPLTWYKTTFDAPAGVAPLALDMGSMGKGQVWINGQSLGRYWPAYKASGSCGYCNYAGTYNEKKCGSNCGEASQRWYHVPHSWLKPSGNLLVVFEELGGDPNGIFLVRRDIDSVCADIYEWQPNLVSYEMQASGKVRSPVRPKAHLSCGPGQKISSIKFASFGTPVGSCGSYREGSCHAHKSYDAFLKNCVGQSWCTVTVSPEIFGGDPCPRVMKKLSVEAICT 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01786 843 Gene3D Glycosidases 26 346 - -
Gma08g01786 843 Pfam Galactose binding lectin domain 765 842 IPR000922 GO:0030246
Gma08g01786 843 SUPERFAMILY (Trans)glycosidases 29 346 IPR017853 -
Gma08g01786 843 Pfam Beta-sandwich domain in beta galactosidase 349 420 IPR041392 -
Gma08g01786 843 Gene3D - 754 843 IPR043159 -
Gma08g01786 843 PRINTS Glycosyl hydrolase family 35 signature 40 57 IPR001944 GO:0004553|GO:0005975
Gma08g01786 843 PRINTS Glycosyl hydrolase family 35 signature 61 79 IPR001944 GO:0004553|GO:0005975
Gma08g01786 843 PRINTS Glycosyl hydrolase family 35 signature 116 135 IPR001944 GO:0004553|GO:0005975
Gma08g01786 843 PRINTS Glycosyl hydrolase family 35 signature 173 188 IPR001944 GO:0004553|GO:0005975
Gma08g01786 843 PRINTS Glycosyl hydrolase family 35 signature 252 267 IPR001944 GO:0004553|GO:0005975
Gma08g01786 843 PRINTS Glycosyl hydrolase family 35 signature 289 304 IPR001944 GO:0004553|GO:0005975
Gma08g01786 843 PRINTS Glycosyl hydrolase family 35 signature 309 325 IPR001944 GO:0004553|GO:0005975
Gma08g01786 843 PRINTS Glycosyl hydrolase family 35 signature 620 634 IPR001944 GO:0004553|GO:0005975
Gma08g01786 843 PRINTS Glycosyl hydrolase family 35 signature 647 663 IPR001944 GO:0004553|GO:0005975
Gma08g01786 843 PANTHER BETA-GALACTOSIDASE 7 837 - -
Gma08g01786 843 ProSiteProfiles SUEL-type lectin domain profile. 757 843 IPR000922 GO:0030246
Gma08g01786 843 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 175 187 IPR019801 GO:0004553|GO:0005975
Gma08g01786 843 SUPERFAMILY Galactose-binding domain-like 404 575 IPR008979 -
Gma08g01786 843 Gene3D - 611 734 - -
Gma08g01786 843 Pfam Glycosyl hydrolases family 35 37 341 IPR031330 -
Gma08g01786 843 PANTHER BETA-GALACTOSIDASE RELATED 7 837 IPR001944 GO:0004553|GO:0005975
Gma08g01786 843 SUPERFAMILY Galactose-binding domain-like 584 747 IPR008979 -
Gma08g01786 843 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01786 Gma-Chr8 15898383 15904271 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01786 10 842 Glycoside Hydrolase AT3G13750 80.526 0.0 1429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01786 - - gmx:100781074 1765.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00096 07 797897 804411 Gma08g01786 08 15898383 15904271 GST
Gma13g03143 13 45567732 45573839 Gma08g01786 08 15898383 15904271 PCT
Gma15g00222 15 1955558 1961319 Gma08g01786 08 15898383 15904271 PCT
Gma08g01786 08 15898383 15904271 Gma13g03143 13 45567732 45573839 PCT
Gma08g01786 08 15898383 15904271 Gma15g00222 15 1955558 1961319 PCT