Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00096 ATGAGCTTCCACAAGCTCATAATGTGGAATGTGCCACTACTCTTGGTGGTGGTGGTGTTTGCATGCTCACTGATTGGTCATGCTTCAGCTTCTGTGTCCTATGACCATAAGGCTATCACCATCAATGGACAAAGAAGGATACTCCTTTCTGGCTCCATTCACTATCCCAGAAGCACCCCTGAGATGTGGCCAGATCTTATTCAGAAGGCAAAGGAAGGAGGTTTGGATGTCATTCAAACTTATGTTTTCTGGAATGGACATGAACCTTCACCTGGCAAATATTATTTTGGGGGAAACTATGATCTGGTGAGGTTCATAAAGCTGGTGCAGCAAGCAGGCCTCTATGTTAACCTCAGAATTGGTCCTTACGTTTGTGCTGAATGGAACTTTGGAGGTTTCCCTGTTTGGCTCAAGTACATTCCAGGTATCAGCTTCAGAACAGACAATGGACCGTTTAAGTTTCAAATGGAAAAGTTTACCAAGAAGATTGTGGATATGATGAAAGCAGAAAGGTTATTCGAGTCTCAGGGCGGTCCAATAATTCTGTCCCAGATTGAAAATGAATATGGGCCTATGGAGTATGAAATTGGTGCTCCTGGTAGAGCCTACACTCAATGGGCAGCACATATGGCTGTAGGACTTGGCACTGGGGTTCCATGGATCATGTGCAAGCAAGAAGATGCTCCTGATCCTATCATTAACACTTGCAATGGTTTCTATTGTGATTATTTCTCTCCAAATAAGGCTTACAAACCAAAGATGTGGACAGAAGCTTGGACTGGCTGGTTTACTGAGTTTGGAGGTGCAGTTCCTCACAGACCTGCTGAGGATTTGGCATTTTCAATTGCAAGGTTTATACAGAAAGGGGGATCATTTGTCAATTATTATATGTATCATGGGGGAACAAATTTTGGTCGAACTGCTGGTGGTCCCTTTATTGCTACGAGCTATGATTACGATGCGCCTCTTGATGAATATGGATTGCCCAGACAGCCAAAGTGGGGTCATCTGAAGGATTTACATAGAGCAATAAAACTCTGTGAACCTGCTTTAGTATCTGGAGATCCTACTGTACAACAGCTTGGAAACTACGAAGAGGCTCATGTTTTTAGATCAAAGTCTGGGGCTTGTGCTGCATTCCTTGCGAACTATAACCCACAATCTTATGCAACAGTGGCATTTGGAAATCAGCGTTACAACTTGCCTCCTTGGTCTATAAGCATTCTTCCTAACTGCAAGCACACTGTTTATAACACTGCAAGGGTTGGTTCTCAGAGCACAACAATGAAGATGACTCGTGTTCCTATTCATGGAGGACTATCTTGGAAAGCATTTAATGAAGAGACAACCACTACTGATGATAGTTCGTTCACTGTGACTGGCCTGTTGGAGCAGATAAATGCAACCAGAGATTTATCTGATTACTTGTGGTACTCCACAGATGTTGTGATCAATTCCAATGAAGGATTTTTGAGGAATGGAAAGAATCCTGTTCTTACAGTTTTGTCTGCTGGGCATGCTTTGCATGTTTTTATCAACAATCAGCTGTCAGGAACTGCATATGGAAGCTTAGAGGCCCCCAAACTAACCTTTAGTGAAAGTGTGAGGCTCAGAGCTGGTGTTAACAAAATTTCTCTTCTAAGTGTTGCAGTTGGGCTTCCGAATGTTGGGCCACATTTTGAAAGATGGAATGCTGGTGTTCTTGGCCCAATTACATTAAGTGGTCTCAATGAGGGGAGAAGGGACTTAACTTGGCAGAAGTGGTCATACAAGGTTGGTCTTAAAGGTGAAGCCTTGAATCTTCATTCTCTTAGTGGAAGTTCCTCTGTTGAGTGGCTTCAGGGCTTTTTAGTTTCCAGAAGACAGCCATTGACTTGGTACAAAACTACCTTTGATGCCCCAGCTGGAGTTGCACCATTGGCTTTAGACATGGGCAGCATGGGCAAAGGTCAAGTGTGGATAAATGGACAAAGTCTGGGCCGCTATTGGCCTGCTTACAAAGCATCCGGTTCTTGTGGTTACTGTAACTATGCTGGAACTTACAACGAGAAGAAATGTGGAAGTAACTGTGGCCAGGCTTCTCAAAGATGGTATCATGTTCCTCACTCATGGCTGAAGCCAACTGGAAATTTATTGGTTGTGTTTGAGGAATTGGGTGGGGATCCGAACGGGATCTTTTTGGTTAGAAGGGATATAGATAGTGTATGTGCTGATATCTATGAGTGGCAACCAAATCTTGTAAGTTATGACATGCAAGCTTCTGGCAAAGTCAGAAGTCCTGTGAGACCAAAAGCACATTTGTCATGTGGCCCTGGACAAAAAATCTCATCAATCAAGTTTGCTAGCTTTGGCACTCCAGTAGGGTCTTGTGGAAACTACCGCGAAGGAAGTTGTCATGCTCACAAGTCATATGATGCTTTCCAAAAGAATTGTGTTGGCCAGAGCTGGTGCACAGTGACAGTGTCTCCTGAAATTTTTGGAGGAGATCCTTGTCCAAGTGTCATGAAGAAACTCTCAGTGGAAGCCATTTGCACCTGA 2538 0.4366 MSFHKLIMWNVPLLLVVVVFACSLIGHASASVSYDHKAITINGQRRILLSGSIHYPRSTPEMWPDLIQKAKEGGLDVIQTYVFWNGHEPSPGKYYFGGNYDLVRFIKLVQQAGLYVNLRIGPYVCAEWNFGGFPVWLKYIPGISFRTDNGPFKFQMEKFTKKIVDMMKAERLFESQGGPIILSQIENEYGPMEYEIGAPGRAYTQWAAHMAVGLGTGVPWIMCKQEDAPDPIINTCNGFYCDYFSPNKAYKPKMWTEAWTGWFTEFGGAVPHRPAEDLAFSIARFIQKGGSFVNYYMYHGGTNFGRTAGGPFIATSYDYDAPLDEYGLPRQPKWGHLKDLHRAIKLCEPALVSGDPTVQQLGNYEEAHVFRSKSGACAAFLANYNPQSYATVAFGNQRYNLPPWSISILPNCKHTVYNTARVGSQSTTMKMTRVPIHGGLSWKAFNEETTTTDDSSFTVTGLLEQINATRDLSDYLWYSTDVVINSNEGFLRNGKNPVLTVLSAGHALHVFINNQLSGTAYGSLEAPKLTFSESVRLRAGVNKISLLSVAVGLPNVGPHFERWNAGVLGPITLSGLNEGRRDLTWQKWSYKVGLKGEALNLHSLSGSSSVEWLQGFLVSRRQPLTWYKTTFDAPAGVAPLALDMGSMGKGQVWINGQSLGRYWPAYKASGSCGYCNYAGTYNEKKCGSNCGQASQRWYHVPHSWLKPTGNLLVVFEELGGDPNGIFLVRRDIDSVCADIYEWQPNLVSYDMQASGKVRSPVRPKAHLSCGPGQKISSIKFASFGTPVGSCGNYREGSCHAHKSYDAFQKNCVGQSWCTVTVSPEIFGGDPCPSVMKKLSVEAICT 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00096 845 Pfam Beta-sandwich domain in beta galactosidase 351 422 IPR041392 -
Gma07g00096 845 PANTHER BETA-GALACTOSIDASE 9 839 - -
Gma07g00096 845 SUPERFAMILY (Trans)glycosidases 31 348 IPR017853 -
Gma07g00096 845 PRINTS Glycosyl hydrolase family 35 signature 42 59 IPR001944 GO:0004553|GO:0005975
Gma07g00096 845 PRINTS Glycosyl hydrolase family 35 signature 63 81 IPR001944 GO:0004553|GO:0005975
Gma07g00096 845 PRINTS Glycosyl hydrolase family 35 signature 118 137 IPR001944 GO:0004553|GO:0005975
Gma07g00096 845 PRINTS Glycosyl hydrolase family 35 signature 175 190 IPR001944 GO:0004553|GO:0005975
Gma07g00096 845 PRINTS Glycosyl hydrolase family 35 signature 254 269 IPR001944 GO:0004553|GO:0005975
Gma07g00096 845 PRINTS Glycosyl hydrolase family 35 signature 291 306 IPR001944 GO:0004553|GO:0005975
Gma07g00096 845 PRINTS Glycosyl hydrolase family 35 signature 311 327 IPR001944 GO:0004553|GO:0005975
Gma07g00096 845 PRINTS Glycosyl hydrolase family 35 signature 622 636 IPR001944 GO:0004553|GO:0005975
Gma07g00096 845 PRINTS Glycosyl hydrolase family 35 signature 649 665 IPR001944 GO:0004553|GO:0005975
Gma07g00096 845 Gene3D Glycosidases 28 348 - -
Gma07g00096 845 SUPERFAMILY Galactose-binding domain-like 586 749 IPR008979 -
Gma07g00096 845 Pfam Galactose binding lectin domain 767 844 IPR000922 GO:0030246
Gma07g00096 845 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Gma07g00096 845 PANTHER BETA-GALACTOSIDASE RELATED 9 839 IPR001944 GO:0004553|GO:0005975
Gma07g00096 845 Gene3D - 602 736 - -
Gma07g00096 845 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 177 189 IPR019801 GO:0004553|GO:0005975
Gma07g00096 845 Gene3D - 756 845 IPR043159 -
Gma07g00096 845 ProSiteProfiles SUEL-type lectin domain profile. 759 845 IPR000922 GO:0030246
Gma07g00096 845 SUPERFAMILY Galactose-binding domain-like 406 577 IPR008979 -
Gma07g00096 845 Pfam Glycosyl hydrolases family 35 39 343 IPR031330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00096 Gma-Chr7 797897 804411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00096 6 844 Glycoside Hydrolase AT3G13750 79.619 0.0 1426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00096 - - gmx:100785688 1773.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00096 07 797897 804411 Gma08g01786 08 15898383 15904271 GST
Gma13g03143 13 45567732 45573839 Gma07g00096 07 797897 804411 PCT
Gma15g00222 15 1955558 1961319 Gma07g00096 07 797897 804411 PCT
Gma07g00096 07 797897 804411 Gma13g03143 13 45567732 45573839 PCT
Gma07g00096 07 797897 804411 Gma15g00222 15 1955558 1961319 PCT