Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g03143 ATGGTTATGTGCTTGAAGCTGAAGCTCATAATGTGGAATGTGGCACTGCTTCTGGCTTTTTCTCTCATTGGTTCTGCTAAGGCCTCAGTGTCCTATGACTCTAAGGCTATCACCATTAATGGCCAGAGAAGAATCCTCATTTCTGGATCCATTCATTACCCAAGGAGCACCCCTGAGATGTGGCCAGATCTTATTCAAAAGGCCAAGGACGGAGGCTTGGATGTGATTCAGACTTATGTTTTCTGGAATGGACACGAACCTTCACCTGGCAAGTATTATTTTGAGGGGAACTATGATCTGGTGAAGTTCATAAAGCTGGTGCAGCAAGCAGGCCTTTATGTTCATCTCAGGATTGGTCCTTATGTCTGTGCTGAGTGGAACTTTGGTGGTTTCCCTGTTTGGCTAAAGTACATTCCAGGAATCAGTTTCAGAACAGACAATGAACCATTTAAGGTTCAAATGCAAAAATTTACCACGAAGATTGTTGATTTGATGAAAGCGGAGAGGTTATATGAATCTCAGGGAGGTCCAATAATTATGTCCCAGATTGAAAATGAATATGGACCTATGGAGTATGAAATTGGTGCTGCCGGTAAAGCTTACACTAAGTGGGCAGCAGAAATGGCTATGGAACTTGGTACTGGGGTTCCATGGATCATGTGCAAGCAAGATGACACTCCTGATCCTCTTattaacacttgcaatggcttctattgtgattatttctctccaaataaggcttacaagccAAAGATGTGGACAGAAGCTTGGACTGGCTGGTTTACCGAGTTTGGAGGTCCTGTTCCTCATCGACCTGCTGAAGACTTGGCATTTTCAGTTGCAAGGTTTATACAGAAAGGGGGATCATTTATAAATTATTACATGTATCATGGAGGAACAAATTTCGGTCGAACTGCTGGTGGTCCCTTTATTGCTACAAGCTATGATTATGATGCACCACTTGATGAATATGGATTGCTCAGGCAACCAAAGTGGGGTCATCTGAAGGATCTACACAGAGCAATAAAACTCTGTGAACCAGCTTTAGTATCTGGAGATCCTACTGTAACAAAGATTGGAAACTATCAAGAGGCTCATGTCTTTAAATCAATGTCTGGAGCCTGTGCCGCATTCCTTGCAAACTACAACCCCAAATCTTATGCAACAGTGGCATTTGGAAACATGCATTACAACTTGCCTCCTTGGTCTATAAGCATTCTTCCTGATTGCAAGAACACCGTTTATAACACTGCTAGGGTTGGTTCTCAGAGTGCCCAGATGAAGATGACTCGTGTTCCTATTCATGGTGGTCTCTCTTGGCTATCATTCAACGAAGAAACAACCACAACTGATGATAGTTCCTTCACAATGACTGGCCTGTTGGAGCAGTTAAATACAACAAGAGATTTATCTGACTACTTGTGGTACTCCACAGATGTTGTGCTTGATCCCAATGAAGGATTTCTGAGAAACGGAAAGGATCCTGTTCTTACTGTGTTTTCTGCTGGGCATGCTTTGCATGTTTTTATAAATGGTCAGCTATCAGGAACTGCATATGGAAGCTTAGAATTCCCTAAACTGACATTTAACGAGGGAGTGAAGCTCAGAACCGGTGTTAACAAGATCTCTCTTCTAAGTGTTGCAGTTGGACTCCCGaatgttggtcctcattttgaaacatggaatgctggtgttcttggcccgatttcattaagtggtctcaacgaagggagaagggacttgtcttggcagaaatggtcttataagGTTGGTCTTAAAGGTGAAACCTTGAGTCTTCACTCTCTTAGTGGAAGTTCGTCAGTGGAGTGGATTCAGGGATCTTTAGTTTCTCAAAGGCAGCCATTGACTTGGTACAAAACAACATTTGACGCGCCAGATGGGACTGCACCATTGGCTTTAGACATGAACAGCATGGGCAAAGGTCAAGTGTGGTTAAATGGACAGAATCTTGGCCGCTACTGGCCTGCTTATAAAGCATCTGGTACTTGTGATTACTGTGACTATGCTGGAACTTATAACGAGAATAAATGCAGAAGTAACTGTGGCGAGGCTTCTCAAAGATGGTATCACGTTCCTCAATCATGGCTAAAGCCAACAGGAAATTTATTGGTTGTGTTTGAAGAGCTAGGTGGAGACCTCAATGGAATCTCTTTGGTTAGAAGGGATATAGATAGTGTATGTGCAGATATTTATGAGTGGCAGCCAAATCTTATAAGCTATCAGATGCAAACTTCTGGCAAAGCACCTGTTAGACCAAAAGTTCATTTATCATGTAGCCCTGGACAGAAAATCTCATCAATCAAATTTGCTAGCTTTGGTACTCCAGTAGGTTCTTGTGGAAACTTCCATGAAGGAAGCTGCCATGCTCACATGTCTTATGATGCCTTTGAAAGGAATTGTGTTGGACAGAACTTGTGCACAGTAGCTGTGTCACCTGAAAATTTTGGAGGAGATCCATGTCCAAATGTCTTGAAGAAACTCTCAGTGGAAGCTATTTGTTCCTGA 2526 0.3987 MVMCLKLKLIMWNVALLLAFSLIGSAKASVSYDSKAITINGQRRILISGSIHYPRSTPEMWPDLIQKAKDGGLDVIQTYVFWNGHEPSPGKYYFEGNYDLVKFIKLVQQAGLYVHLRIGPYVCAEWNFGGFPVWLKYIPGISFRTDNEPFKVQMQKFTTKIVDLMKAERLYESQGGPIIMSQIENEYGPMEYEIGAAGKAYTKWAAEMAMELGTGVPWIMCKQDDTPDPLINTCNGFYCDYFSPNKAYKPKMWTEAWTGWFTEFGGPVPHRPAEDLAFSVARFIQKGGSFINYYMYHGGTNFGRTAGGPFIATSYDYDAPLDEYGLLRQPKWGHLKDLHRAIKLCEPALVSGDPTVTKIGNYQEAHVFKSMSGACAAFLANYNPKSYATVAFGNMHYNLPPWSISILPDCKNTVYNTARVGSQSAQMKMTRVPIHGGLSWLSFNEETTTTDDSSFTMTGLLEQLNTTRDLSDYLWYSTDVVLDPNEGFLRNGKDPVLTVFSAGHALHVFINGQLSGTAYGSLEFPKLTFNEGVKLRTGVNKISLLSVAVGLPNVGPHFETWNAGVLGPISLSGLNEGRRDLSWQKWSYKVGLKGETLSLHSLSGSSSVEWIQGSLVSQRQPLTWYKTTFDAPDGTAPLALDMNSMGKGQVWLNGQNLGRYWPAYKASGTCDYCDYAGTYNENKCRSNCGEASQRWYHVPQSWLKPTGNLLVVFEELGGDLNGISLVRRDIDSVCADIYEWQPNLISYQMQTSGKAPVRPKVHLSCSPGQKISSIKFASFGTPVGSCGNFHEGSCHAHMSYDAFERNCVGQNLCTVAVSPENFGGDPCPNVLKKLSVEAICS 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g03143 841 Gene3D - 745 841 IPR043159 -
Gma13g03143 841 Gene3D Glycosidases 26 346 - -
Gma13g03143 841 Pfam Galactose binding lectin domain 763 840 IPR000922 GO:0030246
Gma13g03143 841 PANTHER BETA-GALACTOSIDASE 14 835 - -
Gma13g03143 841 SUPERFAMILY (Trans)glycosidases 30 346 IPR017853 -
Gma13g03143 841 Pfam Glycosyl hydrolases family 35 37 341 IPR031330 -
Gma13g03143 841 Gene3D - 598 734 - -
Gma13g03143 841 ProSiteProfiles SUEL-type lectin domain profile. 755 841 IPR000922 GO:0030246
Gma13g03143 841 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 175 187 IPR019801 GO:0004553|GO:0005975
Gma13g03143 841 PANTHER BETA-GALACTOSIDASE RELATED 14 835 IPR001944 GO:0004553|GO:0005975
Gma13g03143 841 SUPERFAMILY Galactose-binding domain-like 404 575 IPR008979 -
Gma13g03143 841 Pfam Beta-sandwich domain in beta galactosidase 349 420 IPR041392 -
Gma13g03143 841 SUPERFAMILY Galactose-binding domain-like 584 749 IPR008979 -
Gma13g03143 841 PRINTS Glycosyl hydrolase family 35 signature 40 57 IPR001944 GO:0004553|GO:0005975
Gma13g03143 841 PRINTS Glycosyl hydrolase family 35 signature 61 79 IPR001944 GO:0004553|GO:0005975
Gma13g03143 841 PRINTS Glycosyl hydrolase family 35 signature 116 135 IPR001944 GO:0004553|GO:0005975
Gma13g03143 841 PRINTS Glycosyl hydrolase family 35 signature 173 188 IPR001944 GO:0004553|GO:0005975
Gma13g03143 841 PRINTS Glycosyl hydrolase family 35 signature 252 267 IPR001944 GO:0004553|GO:0005975
Gma13g03143 841 PRINTS Glycosyl hydrolase family 35 signature 289 304 IPR001944 GO:0004553|GO:0005975
Gma13g03143 841 PRINTS Glycosyl hydrolase family 35 signature 309 325 IPR001944 GO:0004553|GO:0005975
Gma13g03143 841 PRINTS Glycosyl hydrolase family 35 signature 620 634 IPR001944 GO:0004553|GO:0005975
Gma13g03143 841 PRINTS Glycosyl hydrolase family 35 signature 647 663 IPR001944 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g03143 Gma-Chr13 45567732 45573839 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g03143 15 841 Glycoside Hydrolase AT3G13750 80.097 0.0 1422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g03143 - - gmx:100787084 1751.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g03143 13 45567732 45573839 Gma13g03143 13 45567732 45573839 ECH
Gma13g03143 13 45567732 45573839 Gma15g00222 15 1955558 1961319 GST
Gma13g03143 13 45567732 45573839 Gma07g00096 07 797897 804411 PCT
Gma13g03143 13 45567732 45573839 Gma08g01786 08 15898383 15904271 PCT
Gma07g00096 07 797897 804411 Gma13g03143 13 45567732 45573839 PCT
Gma08g01786 08 15898383 15904271 Gma13g03143 13 45567732 45573839 PCT