Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00209 ATGGGTTTTTTCTTCAAATGGGTCAACTTGTTTGTCTTTTTTCATTTCCTTGCTGCAACACCCATCTTCTCAGATTCCTCCTCCAGCTCAAATGCATTCGTCACCACCAAGTTCCTAGATTTAGCCAAGGATCCTCTGGTATTTGATTGGATGATTGGTATCAGGAGGAAGATTCATGAGAATCCAGAACTGGGTTATGAGGAATTTGAGACCAGTAAGCTGATAAGAACTGAATTGGATAAACTGGGCATCTCATATAAATACCCAGTTGCAGTCACTGGTGTTGTTGGCTTCATAGGGACTGGACTCCCTCCTTTTGTTGCATTAAGAGCTGACATGGATGCTCTTCCTCTGCAGGAAATGGTGGAGTGGGAGCACAAGAGTAAAGTACCTGGAAAGATGCATGCATGCGGTCATGATGCTCATGTTGCCATGCTTCTCGGTGCTGCAAAGATCCTCAAACGGCATGAAAATGAGATACGAGGAACTGTTGTTCTTGTTTTTCAACCAGCAGAAGAAGGAGGTGGAGGGGCTAAGAAAATTTTAGATGCTGGAGTCTTGGAAAATATCTCTGCCATATTTGGATTGCATATTGTACCTACCTATCCTATTGGTGAAGTGGCCTCAAGGTCGGGTCCCATATTTGCTGGAAGCGGCTTCTTTGAAGCAACAATAAATGGCAGGGGAGGCCATGCAGCTATCCCTCAGCACTCTATAGATCCAATATTGGCTGCTTCCAATGTGATTGTTAGCTTACAGCATATTGTTTCTCGTGAGGCTGATCCTCTGGACTCCCAGGTTGTGACTGTAGGAAAGTTTCAAGGAGGTGGTGCTTTCAATGTTATTCCAGACTCTGTCACAATTGGTGGCACCTTCCGAGCTTTTTCAAAAGAAAGCTTCATGCAACTGAGACAGCGGATTGAGCAGgttatcactggtcaagccgctgtgcagagatgcaatgcaacggtcaactttcttgatgatgagaaacctttctccccccctacagTAAACAACGGGGACTTGCATGGGTACTTTGAAAGTGTTGCTGGGAGTTTGCTTGGCGTGAATAATGTCAAGGAGATGCAACCATTGATGGGATCTGAGGACTTTGCATTCTATCAAGAGCACTGTAAAGATTCACCCCAGAAGCCAGGTGGTTATATGAAAAATATTCTGGAAGAAATCCTGGTTGATGTCATATGTTCCGAAGCATTCGATTGCAGGGGCAGAGTGAAGCCGCGAAATGATGAGCATTTCAACATTCTGCTGCCACTGCACATTCGAAGGTTTCGGCCTTGTCTATCCACTCTCTCCTGTTCTCTCGGCGAAGATGTGGACCCCACTCCCAATTCCTACTTCCCCAAACGTGGCCTAACCCTGGACTGGTGTGCGAATCCCTTGCTTTCAAAGGCAAGGGCCTCTGCTAGGTCACCCAAACCGGCTTCGTTGTCCTCTGCGACCGCCGCGTCACCCGCAAAAAGGGTAACTAACTCTCCTTATTGCGGCGGCTGCAAGACGCAAAACTTGTCCTACGAGGCTCAGCTCAGAGCCAAGGAGGAGCAGGTTCGCGACCTGTTGATTCACGTAGGAAGATTTTCTCGCGAACAACTCCAACTGCACGGGGTTATCAAGCCCATTGTTCCTTTTGATATTCAGTTTCATTACAGGAATGAGATGGAATTCTCGTTTGGTCCCCGAAGATGGTTGCCTAAAGAATTACTGCAAGACAGACGTGCTGATGATGATGTTGGTAACAATGAAAATTATGCGCTGGGATTGCATGCTCCTGGTTTTTTTGATAAAATTCTAAATGTTGACAACTGCTTACTGCAATCTCATCCTGCTAATAAGGTACTTGCAGCTGTCCAAGAATGTTGGAGAGATCCACAACTTGGTTTTTCTCCCTACAGTGTTCATTCACACAAGGGATTTCTTAAGCATTTGATGCTGAGAACTGGAAGGGATGTAACAACTTATCAGCCTGAAGTTATGGTCAACTTTGTGACCTCTTCCTACAAGCCTGAGCTGTTGAAGTTCCTAGTTGATAAAGTTTCTGTATTTCCTGAAGTGGTAAGTGTCGTTAATAATGTAAATACATCTGTTGGGGAGGAAGAATACACTTTGTACGGTAAATCTAGCATTACAGAGACCTTAAGAGGGTGTACATTCCAAATATCAGCCAACTCTTTCTTTCAAACAAATACTTATCAGGCAGAGGTTTTATATAAGCTTATAGAAGATTGTGCTGGAGTCAGGGGTGATGGCTCAGAAATTGTCCTTGACCTGTTTTGTGGAACAGGCACAATAGGTTTGACGCTTGCAAGAAGTGATAGACATGTTTATGGCTATGAAGGAGATCTCAATAAAATTGATGAGAATTTTGGGAAGAATTTTCCTAAACCTGACATTGTCATTTCAGATCCCAATCGCCCAGGAATGCACATGAAGTTGATTAAGTTCCTTCTAAATCTTAGGGCACCTCGCATAGTGTATGTCTCTTGTAATCCTGCCACATGTGCACGCGACCTTGATTATCTTTGTCATGGTGTGGTGGAACAGAATATAAAAGGATTAATCTGTGATAAATTAAAACTTTCCATTTCAAGGGGATTACAAGCTTAA 2628 0.425 MGFFFKWVNLFVFFHFLAATPIFSDSSSSSNAFVTTKFLDLAKDPLVFDWMIGIRRKIHENPELGYEEFETSKLIRTELDKLGISYKYPVAVTGVVGFIGTGLPPFVALRADMDALPLQEMVEWEHKSKVPGKMHACGHDAHVAMLLGAAKILKRHENEIRGTVVLVFQPAEEGGGGAKKILDAGVLENISAIFGLHIVPTYPIGEVASRSGPIFAGSGFFEATINGRGGHAAIPQHSIDPILAASNVIVSLQHIVSREADPLDSQVVTVGKFQGGGAFNVIPDSVTIGGTFRAFSKESFMQLRQRIEQVITGQAAVQRCNATVNFLDDEKPFSPPTVNNGDLHGYFESVAGSLLGVNNVKEMQPLMGSEDFAFYQEHCKDSPQKPGGYMKNILEEILVDVICSEAFDCRGRVKPRNDEHFNILLPLHIRRFRPCLSTLSCSLGEDVDPTPNSYFPKRGLTLDWCANPLLSKARASARSPKPASLSSATAASPAKRVTNSPYCGGCKTQNLSYEAQLRAKEEQVRDLLIHVGRFSREQLQLHGVIKPIVPFDIQFHYRNEMEFSFGPRRWLPKELLQDRRADDDVGNNENYALGLHAPGFFDKILNVDNCLLQSHPANKVLAAVQECWRDPQLGFSPYSVHSHKGFLKHLMLRTGRDVTTYQPEVMVNFVTSSYKPELLKFLVDKVSVFPEVVSVVNNVNTSVGEEEYTLYGKSSITETLRGCTFQISANSFFQTNTYQAEVLYKLIEDCAGVRGDGSEIVLDLFCGTGTIGLTLARSDRHVYGYEGDLNKIDENFGKNFPKPDIVISDPNRPGMHMKLIKFLLNLRAPRIVYVSCNPATCARDLDYLCHGVVEQNIKGLICDKLKLSISRGLQA 875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00209 875 Pfam Peptidase dimerisation domain 217 314 IPR011650 -
Gma15g00209 875 Pfam Peptidase family M20/M25/M40 108 378 IPR002933 GO:0016787
Gma15g00209 875 Gene3D - 558 733 - -
Gma15g00209 875 CDD M20_IAA_Hyd 51 377 IPR044757 GO:0009850|GO:0016787
Gma15g00209 875 Gene3D Vaccinia Virus protein VP39 505 851 IPR029063 -
Gma15g00209 875 ProSiteProfiles SAM-dependent methyltransferase RNA m(5)U-type domain profile. 504 875 IPR010280 GO:0006396|GO:0008173
Gma15g00209 875 CDD AdoMet_MTases 761 827 - -
Gma15g00209 875 MobiDBLite consensus disorder prediction 476 496 - -
Gma15g00209 875 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 501 851 IPR029063 -
Gma15g00209 875 TIGRFAM amidohydrolases: amidohydrolase 51 380 IPR017439 GO:0016787
Gma15g00209 875 Gene3D Zn peptidases 51 380 - -
Gma15g00209 875 SUPERFAMILY Bacterial exopeptidase dimerisation domain 216 335 IPR036264 -
Gma15g00209 875 PANTHER PEPTIDASE M20 FAMILY MEMBER 3 378 IPR017439 GO:0016787
Gma15g00209 875 MobiDBLite consensus disorder prediction 480 496 - -
Gma15g00209 875 SUPERFAMILY Zn-dependent exopeptidases 48 380 - -
Gma15g00209 875 Gene3D - 216 334 - -
Gma15g00209 875 PANTHER AUXIN CONJUGATE HYDROLASE 3 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00209 Gma-Chr15 1806577 1815750 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00209 K21604 - gmx:100792044 738.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00209 15 1806577 1815750 Gma15g00209 15 1806577 1815750 ECH
Gma13g03157 13 45690949 45695146 Gma15g00209 15 1806577 1815750 GST
Gma15g00209 15 1806577 1815750 Gma07g00124 07 1041710 1052376 PCT
Gma15g00209 15 1806577 1815750 Gma08g01821 08 16224676 16230985 PCT
Gma07g00124 07 1041710 1052376 Gma15g00209 15 1806577 1815750 PCT
Gma08g01821 08 16224676 16230985 Gma15g00209 15 1806577 1815750 PCT