Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g03157 ATGGGTTTTTTCTTGAAATGGGTCAACTTGTTTGTCTTTTTTCATTTCCTTGCTGCAACACCCATCTTCTCAGATTCCTCCTCCAGCTCAAATGCAATCGCCACCACCAAGTTCCTTGATTTAGCCAAGGATCCTCGGGTTTTTGATTGGATGGTTGGTATCAGGAGGAAGATTCATGAGAATCCAGAACTGGGTTATGAGGAATTTGAGACCAGTAAGCTGATTAGAGCTGAATTGGATAAACTGGGCATCTCATATAAACACCCAGTTGCAGTCACGGGTGTTGTTGGCTTCATAGGGACTGGACTTCCTCCTTTTGTTGCATTAAGAGCTGACATGGATGCTCTTCCTATGCAGGAAATGGTGGAGTGGGAGCACAAGAGTAAAGTACCTGGAAAGATGCATGCATGCGGTCATGATGCTCATGTTGCCATGCTTCTTGGTGCTGCAAAGATCCTCAAAGAGCATGAAAATGAGATACGAGGAACTGTTGTTCTTGTTTTTCAACCAGCAGAAGAAGGAGGTGGAGGGGCTAAGAAAATTTTAGATGCTGGAGTCTTGGAAAACATCTCTGCCATATTCGGATTGCATATTGCACCTACCTATCCTATAGGTGAAGTGGCCTCTAGGTCGGGTCCCATATTTGCAGGAAGCGGCTTCTTTGAAGCAACAATAAATGGCAGGGGAGGCCATGCTGCTATCCCTCAGCACTCTATAGACCCAATATTGGCAGCTTCCAATGTGATTGTTAGTTTACAGCATATTGTTTCTCGCGAGGCCGATCCTCTGGACTCCCAGGTCGTCACTGTAGGAAAATTTCAGGGAGGTGGTGCTTTCAATGTTATTCCAGACTCTGTTGCAATTGGTGGCACCTTCCGAGCTTTTTCAAAAGAAAGCTTCATGCAACTGAGACAGAGGATTGAACAGgttatcactgggcaagctgcagtgcagagatgcaatgcaacggtcaactttcttgacgacgagaaacctttcttccctcctacagtaaacaatggtgACTTGCATGAGTACTTTAAAAGTGTTGCTGGGAGTTTGCTTGGCGTCAATAATGTTAAGGACATGCAACCATTGATGGGATCTGAGGACTTTGCATTCTATCAAGAGGTTTTTCCGGGATACTTCTTCCTCCTTGGAATGGAGAATGTCTCTATTGAACATCTTGAATCTCCacactctccatatttcaaaatcaatgaggacgcacttccttatggagctgcacttcatgcatcattagctagcagctatcttctcaaattaaatcaggacataccagTAGTGGAGGGGAAACATCACGATGAATTATAG 1335 0.3775 MGFFLKWVNLFVFFHFLAATPIFSDSSSSSNAIATTKFLDLAKDPRVFDWMVGIRRKIHENPELGYEEFETSKLIRAELDKLGISYKHPVAVTGVVGFIGTGLPPFVALRADMDALPMQEMVEWEHKSKVPGKMHACGHDAHVAMLLGAAKILKEHENEIRGTVVLVFQPAEEGGGGAKKILDAGVLENISAIFGLHIAPTYPIGEVASRSGPIFAGSGFFEATINGRGGHAAIPQHSIDPILAASNVIVSLQHIVSREADPLDSQVVTVGKFQGGGAFNVIPDSVAIGGTFRAFSKESFMQLRQRIEQVITGQAAVQRCNATVNFLDDEKPFFPPTVNNGDLHEYFKSVAGSLLGVNNVKDMQPLMGSEDFAFYQEVFPGYFFLLGMENVSIEHLESPHSPYFKINEDALPYGAALHASLASSYLLKLNQDIPVVEGKHHDEL 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g03157 444 CDD M20_IAA_Hyd 51 426 IPR044757 GO:0009850|GO:0016787
Gma13g03157 444 PIRSF Amidohydrol_AmhX 37 430 IPR017439 GO:0016787
Gma13g03157 444 Pfam Peptidase family M20/M25/M40 108 422 IPR002933 GO:0016787
Gma13g03157 444 PANTHER PEPTIDASE M20 FAMILY MEMBER 3 444 IPR017439 GO:0016787
Gma13g03157 444 PANTHER AUXIN CONJUGATE HYDROLASE 3 444 - -
Gma13g03157 444 SUPERFAMILY Bacterial exopeptidase dimerisation domain 216 335 IPR036264 -
Gma13g03157 444 Pfam Peptidase dimerisation domain 217 314 IPR011650 -
Gma13g03157 444 TIGRFAM amidohydrolases: amidohydrolase 51 413 IPR017439 GO:0016787
Gma13g03157 444 SUPERFAMILY Zn-dependent exopeptidases 47 427 - -
Gma13g03157 444 Gene3D Zn peptidases 51 411 - -
Gma13g03157 444 Gene3D - 216 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g03157 Gma-Chr13 45690949 45695146 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g03157 K21604 - gmx:100794121 873.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g03157 13 45690949 45695146 Gma13g03157 13 45690949 45695146 ECH
Gma13g03157 13 45690949 45695146 Gma15g00209 15 1806577 1815750 GST
Gma13g03157 13 45690949 45695146 Gma07g00124 07 1041710 1052376 PCT
Gma13g03157 13 45690949 45695146 Gma08g01821 08 16224676 16230985 PCT
Gma07g00124 07 1041710 1052376 Gma13g03157 13 45690949 45695146 PCT
Gma08g01821 08 16224676 16230985 Gma13g03157 13 45690949 45695146 PCT