Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00124 ATGTGTTCCTTCAAAACATGGTTCAATTTGTTCATCATTTTCCTTGCCTCGGCTGCAACACCCATCTTCTCATTAACAGATTCCCCAAATCAACTCTCCACAAACTTTCTAGAAATTGCCAAGAAACCTGAAGTATTTGATTGGATGGTGAAAATCAGAAGGAAGATTCATGAGAATCCAGAATTGGGTTATGAGGAATTTGAGACCAGTAAACTCATTAGAGAGGAATTGGATAAACTGGGTGTCCCCTATAAACACCCAGTTGCTGTCACTGGTATTATTGGCTTCATTGGGACAGGAAAGTCACCTTTTGTTGCAATAAGAACTGATATGGATGCACTTCCCATCCAGGAAATGGTGGAGTGGGAGCACAAGAGTAAAGTACCTGGAAAGATGCACGCATGTGGTCATGATGCTCATGTCGCTATGCTTCTTGGGGCAGCAAAGATTCTCAAACAACATGAAAAACAGTTGCAGGGAACTGTTGTTCTTGTTTTTCAACCAGCAGAGGAAGGAGGTGCAGGGGCTAAGAAAATTTTAGATGCTGGAGCCTTAGATAATGTTACTGCTATCTTTGGATTACATGTGACGCCTGACATTCCAGTAGGTGAAGTGGCCTCTAGGTGTGGTCCATTATCGGCAGGAAGTGGTGTATTTGAAGCAATAATAAGAGGAAAGGGAGGTCATGCAGCTCTTCCCCAACTTTCTATAGACCCTGTGATGGCAGCTACTAATGTGATTATTAGCTTACAAAACCTTGTTTCTCGCGAGGCTGATCCTCTTGATCCTCAGGTTTTGACAATTGCAAAGCTCCAAGGAGGTGATGCTTTCAATGTTATTCCAGATTATGTCACAATTGGTGGCACCTTCCGAGCTTTTTCTAGAGAAAGATTGGAGCACCTTAAACAGCGCATTGAGCAGgttatcattggtcaagctgctgtgcagaggtgcaatgcaactgtcaacttccttgatgaagagaatcctttatatcccccaacTGTAAATAACGGTGACCTGCACAAGTTTTTTGTTGATGTAGCTGGGAATTTGCTTGGTATCAATAAAGTTGACACTAACATGGAACAAGACATGGCCGCTGAAGACTTCGCATTCTATCAAGAGTTCATACCTGGCTACTACTTCACTCTTGGAATGGAGATTGCTTCATCTGAACCGGTtgcgccattacactcgccctatcttGTTGGAGTGGATGTGGACCCTCACAATCTTACTAAGCAAAAGAAACAACGTCGATTGCTGTTTTACTATCCTCGTTCCTTCCTTCCTTCTGTTCTGTCTGTTATTCATCTCATTCTCTCAAACACCAAACAAATTATGTGTTTCTTCAAATGGTTCAATTTGTTCATCATTTTCCATGTCTTGGCTGCAACACCCATCTTCTCATTAACAGATTCCTCAAATCAAGTCTCCACTAACTTTCTGGACAATACCAATAAGCCTGAAGTGTTTGATTGGATGGTCAAAATCAGAAGGAAAATTCATGAGAATCCAGAATTGCGTTATGAGGAAGTTGAGACCAGTAAACTGATTAGAGAGGAATTGGATAAACTGGGTATCCCATATAAATACCCAGTTGCAATCACTGGTGTTATTGGTTACATAGGGACAGGAAGCTCACCTTTTGTTGCAATAAGAGCTGATATGGATGCACTTCCCATCCAGGAAATGGTGGAGTGGGACCACAAGAGTAAGGTACCCGGAAAGATGCACGCGTGTGGTCACGATGCTCATGTCACTATGCTTCTTGGTGCAGCAAATATTCTCAAACAGCACGAAAAAGAGATACAGGGAACTGTTGTTCTTGTTTTCCAACCAGCGGAGGAGGGAGGCGCAGGGGCTAAGAAAATTTTAGATGCTGGAGCCTTAGAAAATGTTACTGCTATCTTTGCATTACATGTGATGCCTGACATTCCACTAGGTGAAGCAGCCTCTAGGTCTGGTCCAATATTGGCAGGAAGTGGTACCTTCGAAGCAATAATAAGTGGAAAGGGAGGTCATGCAGCCATTCCCCAACATTCTATAGACCCTGTATTGGCAGCTTCTAATGTCATTATTAGCTTACAGCACCTTGTCTCTCGTGAGGCTGATCCTCTGGATCCCCAGGTTGTGACAGTTGCTAAGTTCCAAGGAGGTGGTGCATTCAATGTTATTCCAGATTATGTCACAATTGGTGGCACCTTTCGAGCTTTTTCTAGAGAAAAATTGGACCAACTTAAACAGCGCATTAAGCAGgttgtcattggtcaagctgctgtgcagaggtgtaatgcaactgtcaacttccttgatgaaacaagaccttcatatcctccaacTGTAAATAATGGTGACTTGCACAAGCTTTTTGTTGATGTAGCTGGCAATTTGCTTGGCACCAATAATGTTAATATTGAGAAGACACCTATCATGGCCGCTGAAGACTTTGCATTCTATCAAGAGGTCATACCTGGCTACTTCATCATGCTTGGAGTGAAGAGTGCTTCGCCTGAACCGCACCAGTcattacactcaccctatctcaaaatcagtgaagatgcacttccttatggggctgcacttcatgcatcattggctactagttatcttctgaggtaccagcaggacgtagccaagATTCAATGTCCTAGACATCTAAATGCTGGAGGAGCAACTCAAAATTTCTGCAAAGCAGGGAGATTAGATGATGAATCATGCGACTAA 2730 0.3791 MCSFKTWFNLFIIFLASAATPIFSLTDSPNQLSTNFLEIAKKPEVFDWMVKIRRKIHENPELGYEEFETSKLIREELDKLGVPYKHPVAVTGIIGFIGTGKSPFVAIRTDMDALPIQEMVEWEHKSKVPGKMHACGHDAHVAMLLGAAKILKQHEKQLQGTVVLVFQPAEEGGAGAKKILDAGALDNVTAIFGLHVTPDIPVGEVASRCGPLSAGSGVFEAIIRGKGGHAALPQLSIDPVMAATNVIISLQNLVSREADPLDPQVLTIAKLQGGDAFNVIPDYVTIGGTFRAFSRERLEHLKQRIEQVIIGQAAVQRCNATVNFLDEENPLYPPTVNNGDLHKFFVDVAGNLLGINKVDTNMEQDMAAEDFAFYQEFIPGYYFTLGMEIASSEPVAPLHSPYLVGVDVDPHNLTKQKKQRRLLFYYPRSFLPSVLSVIHLILSNTKQIMCFFKWFNLFIIFHVLAATPIFSLTDSSNQVSTNFLDNTNKPEVFDWMVKIRRKIHENPELRYEEVETSKLIREELDKLGIPYKYPVAITGVIGYIGTGSSPFVAIRADMDALPIQEMVEWDHKSKVPGKMHACGHDAHVTMLLGAANILKQHEKEIQGTVVLVFQPAEEGGAGAKKILDAGALENVTAIFALHVMPDIPLGEAASRSGPILAGSGTFEAIISGKGGHAAIPQHSIDPVLAASNVIISLQHLVSREADPLDPQVVTVAKFQGGGAFNVIPDYVTIGGTFRAFSREKLDQLKQRIKQVVIGQAAVQRCNATVNFLDETRPSYPPTVNNGDLHKLFVDVAGNLLGTNNVNIEKTPIMAAEDFAFYQEVIPGYFIMLGVKSASPEPHQSLHSPYLKISEDALPYGAALHASLATSYLLRYQQDVAKIQCPRHLNAGGATQNFCKAGRLDDESCD 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00124 909 PANTHER PEPTIDASE M20 FAMILY MEMBER 449 887 IPR017439 GO:0016787
Gma07g00124 909 SUPERFAMILY Bacterial exopeptidase dimerisation domain 215 324 IPR036264 -
Gma07g00124 909 PANTHER AUXIN CONJUGATE HYDROLASE 449 887 - -
Gma07g00124 909 CDD M20_IAA_Hyd 496 872 IPR044757 GO:0009850|GO:0016787
Gma07g00124 909 Gene3D - 214 332 - -
Gma07g00124 909 Gene3D - 661 779 - -
Gma07g00124 909 TIGRFAM amidohydrolases: amidohydrolase 49 402 IPR017439 GO:0016787
Gma07g00124 909 TIGRFAM amidohydrolases: amidohydrolase 496 859 IPR017439 GO:0016787
Gma07g00124 909 SUPERFAMILY Bacterial exopeptidase dimerisation domain 662 771 IPR036264 -
Gma07g00124 909 Pfam Peptidase family M20/M25/M40 106 388 IPR002933 GO:0016787
Gma07g00124 909 Pfam Peptidase family M20/M25/M40 553 868 IPR002933 GO:0016787
Gma07g00124 909 SUPERFAMILY Zn-dependent exopeptidases 491 872 - -
Gma07g00124 909 PANTHER PEPTIDASE M20 FAMILY MEMBER 1 404 IPR017439 GO:0016787
Gma07g00124 909 SUPERFAMILY Zn-dependent exopeptidases 44 404 - -
Gma07g00124 909 CDD M20_IAA_Hyd 49 402 IPR044757 GO:0009850|GO:0016787
Gma07g00124 909 Pfam Peptidase dimerisation domain 662 756 IPR011650 -
Gma07g00124 909 Pfam Peptidase dimerisation domain 217 309 IPR011650 -
Gma07g00124 909 Gene3D Zn peptidases 49 403 - -
Gma07g00124 909 Gene3D Zn peptidases 496 857 - -
Gma07g00124 909 PANTHER AUXIN CONJUGATE HYDROLASE 1 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00124 Gma-Chr7 1041710 1052376 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00124 K21604 K14664 gmx:121172631 866.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00124 07 1041710 1052376 Gma07g00124 07 1041710 1052376 ECH
Gma07g00124 07 1041710 1052376 Gma08g01821 08 16224676 16230985 GST
Gma13g03157 13 45690949 45695146 Gma07g00124 07 1041710 1052376 PCT
Gma15g00209 15 1806577 1815750 Gma07g00124 07 1041710 1052376 PCT
Gma07g00124 07 1041710 1052376 Gma13g03157 13 45690949 45695146 PCT
Gma07g00124 07 1041710 1052376 Gma15g00209 15 1806577 1815750 PCT