Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01821 ATGAGCTCCTTCAAAACATGGTTCAATTTGTTCACCATTTTCTATGTCTTGGCTGCAACTCCAATCTTCTCATTAACAGATTCCTCAAACCAACTCTCCACAAACTTTCTAGAAATTGCCAAGAAACCTGAAGTTTTTGACTGGATGGTGAAAATCAGAAGGAAGATTCATGAGAATCCAGAGTTGGGTTATGAGGAATTTGAGACCAGTAAACTCATTAGAGAGGAATTGGATAAACTGGGTATCCCATATAAATACCCAGTTGCAGTCACCGGTGTTATTGGCTTCATTGGGACAGGAAAGTCACCTTTTGTTGCATTAAGAGCTGATATGGATGCACTTCCCGTCCAGGAAATGGTGGAGTGGGAGCACAAGAGTAAAGTACCTGGAAAGATGCACGCCTGCGGTCATGATGCTCATGTCACTATGCTTCTTGGTGCAGCAAATATTCTCAAACAGCATGAAAAAGAGATACAGGGGACTGTTGTTCTTGTTTTCCAACCAGCCGAGGAAGGAGGTGGAGGGGCTAAGAAAATTTTAGATGCTGGAGCCTTAGAAAATGTTACTGCTATCTTTGGATTACACGTGGTGCCTCTCATTCCAGTAGGTACAGCGGCCTCTAGGTCCGGTCCATTAACGGCTGGAAGTGGTTTCTTTGAAGCCAAAATAAGTGGAAAGGGAGGTCATGCAGCTATTCCCCAACTTTCTATAGACCCCATATTGGCGGCTTCTAATGTCATTATTAGCCTTCAGCACCTTGTTTCTCGCGAGGCTGATCCTCTAGATCCCCGGGTTGTCACAGTTTCAAAGATTCAAGGAGGTGATGCATTCAATGTTATTCCTGATTATGCCACAATTGGTGGCACCTACCGTGGTTTTACTAATAAAAGCATGGACCAACTTAAATTGCGAATCAAGCAGGTTATCATCGGTCAAGCTGCTGTGCAGAGATGCAATGCAACTGTTAACTTCTTTGAAAATGTGGGACCAGCGAATCCTCCAACTGTGAATAATGGTGACTTGCACAAGCATTTTCAAAATGTTGCTGAGAATGTGCTTGGCGTCAATAATGTTAATCTTAACATGCCACCATTCATGGTAGCTGAAGACTTTGCATTCTATCAAGAGGTCATACCTGGCTACTTCTTCACGCTTGGAATGAAGTATGCTTCACCTAATGAACCGTTTCAGTCATTACACTCACCATATCTCAGAATCAATGAAGATGGACTTCCTTATGGGGCTGCACTTCACGCATCATTAGCTACTAGTTATCTTATAAAACTTCAGCAGTAA 1296 0.4282 MSSFKTWFNLFTIFYVLAATPIFSLTDSSNQLSTNFLEIAKKPEVFDWMVKIRRKIHENPELGYEEFETSKLIREELDKLGIPYKYPVAVTGVIGFIGTGKSPFVALRADMDALPVQEMVEWEHKSKVPGKMHACGHDAHVTMLLGAANILKQHEKEIQGTVVLVFQPAEEGGGGAKKILDAGALENVTAIFGLHVVPLIPVGTAASRSGPLTAGSGFFEAKISGKGGHAAIPQLSIDPILAASNVIISLQHLVSREADPLDPRVVTVSKIQGGDAFNVIPDYATIGGTYRGFTNKSMDQLKLRIKQVIIGQAAVQRCNATVNFFENVGPANPPTVNNGDLHKHFQNVAENVLGVNNVNLNMPPFMVAEDFAFYQEVIPGYFFTLGMKYASPNEPFQSLHSPYLRINEDGLPYGAALHASLATSYLIKLQQ 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01821 431 Gene3D Zn peptidases 49 410 - -
Gma08g01821 431 PANTHER AUXIN CONJUGATE HYDROLASE 1 431 - -
Gma08g01821 431 SUPERFAMILY Bacterial exopeptidase dimerisation domain 215 324 IPR036264 -
Gma08g01821 431 SUPERFAMILY Zn-dependent exopeptidases 44 426 - -
Gma08g01821 431 Gene3D - 214 332 - -
Gma08g01821 431 PIRSF Amidohydrol_AmhX 34 430 IPR017439 GO:0016787
Gma08g01821 431 PANTHER PEPTIDASE M20 FAMILY MEMBER 1 431 IPR017439 GO:0016787
Gma08g01821 431 TIGRFAM amidohydrolases: amidohydrolase 49 413 IPR017439 GO:0016787
Gma08g01821 431 Pfam Peptidase family M20/M25/M40 106 422 IPR002933 GO:0016787
Gma08g01821 431 CDD M20_IAA_Hyd 49 426 IPR044757 GO:0009850|GO:0016787
Gma08g01821 431 Pfam Peptidase dimerisation domain 215 309 IPR011650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01821 Gma-Chr8 16224676 16230985 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01821 K21604 K14664 gmx:100789607 846.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g01821 08 16224676 16230985 Gma08g01821 08 16224676 16230985 ECH
Gma07g00124 07 1041710 1052376 Gma08g01821 08 16224676 16230985 GST
Gma13g03157 13 45690949 45695146 Gma08g01821 08 16224676 16230985 PCT
Gma15g00209 15 1806577 1815750 Gma08g01821 08 16224676 16230985 PCT
Gma08g01821 08 16224676 16230985 Gma13g03157 13 45690949 45695146 PCT
Gma08g01821 08 16224676 16230985 Gma15g00209 15 1806577 1815750 PCT