Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00133 ATGCCTCTCAGACTCGAAATCAAGCGCAAGCTTGCGCAAAGATCAGAGAGAGTGAAATGTGTGGATCTACATCCAACAGAGCCATGGATTCTGGCTAGTTTATACTCTGGAACTGTCTGTATCTGGAACTACCAGTCTCAGACCATGGCAAAATCTTTTGAGGTTACCGAGTTACCAGTTAGATCGGCCAAGTTTATTGCACGCAAACAGTGGGTTGTTGCTGGAGCAGATGATATGTTTATCCGTGTATATAATTACAACACAATGGATAAAGTCAAAGTATTTGAAGCACATACTGATTACATTAGGTGTGTGGCAGTTCATCCTACCCTTCCTTATGTGCTTTCATCATCTGATGATATGCTCATAAAGCTTTGGGATTGGGAAAAAGGCTGGATCTGTACCCAGATATTTGAAGGTCATTCTCATTATGTCATGCAAGTAACATTTAATCCCAAAGACACAAACACCTTTGCAAGTGCATCTCTTGATCGGACAATAAAGATTTGGAATCTTGGCTCTCCTGACCCTAATTTTACTTTGGATGCTCATCAGAAAGGAGTGAATTGTGTTGATTATTTTACAGGTGGTGACAAACCATATCTAATCACTGGTTCTGATGATCACACTGCTAAGGTATGGGATTATCAGACCAAAAGTTGTGTCCAGACCCTAGAAGGTCACACACACAATGTATCTGCTGTATGCTTTCATCCTGAACTTCCTATAATCATTACTGGTTCTGAGGATGGCACAGTACGCATATGGCACTCCACAACTTATAGGCTTGAGAACACATTAAACTATGGTCTTGAAAGAGTCTGGGCTATTGGATACTTGAAGAGTTCTCGTCGGGTTGTGATTGGCTATGATGAAGGAACAATTATGGTCAAACTTGGTCGAGAAGTACCTGTGGCTAGCATGGACAACAGTGGGAAAATTATTTGGTCTAAGCATAATGAAATTCAGACTGTCAATATAAAAAGTGTAGGAGCAGATGTAGAGGTTGCTGACGGAGAAAGGTTACCTTTAGCTGTTAAGGAGTTGGGCACCTGTGATCTCTACCCCCAAAATTTAAAGCACAATCCAAATGGGAGGTTTGTTGTTGTATGTGGAGATGGTGAGTACATTATATACACTGCATTGGCATGGAGAAATAGGTCATTTGGTTCAGCACTGGAATTTGTTTGGTCTTCTGAGGGAGAATATGCTGTCAGAGAAAGTACATCAAAGATTAAAATTTTCAGCAAAAATTTCCAGGAAAAGAGGAGTGTCCGACCAACATTTTCAGCTGAAAGAATATTCGGTGGCACTTTACTGGCGATGTGCTCCAACGATTTCATCTGCTTTTATGACTGGGCTGAATGCAGGTTGATCTATCGCATTGATGTCAATGTGAAAAACCTCTACTGGGCTGACAGTGGTGATCTAGTAACAATTGCTAGTGATACATCATTCTACATTCTGAAGTACAATCGTGATGTTGTTGTATCACATTTAGATAGTGGAAGACCTGTAGATGATGAAGGTGTTGAAGATGCTTTTGAGCTCTTACATGAAATGAATGAACGTGTCAGGACAGGCATCTGGGTTGGGGATTGCTTTATCTACAACAATACCTCTTGGAGACTTAATTACTGTGTTGGTGGTGAGGTAACTACGATGTTTCATTTGGACCGCCCTATGTACTTGTTGGGATATCTTGCAAACCAAAGTCGTGTTTATTTGATTGACAAAGAGTTTAATGTTATGGGATACACACTGCTTTTAAGCTTGATTGAGTACAAGACACTTGTGATGCGTGGTGATTTGGAAAGGGCCAATGATATTCTGCCATCAATCCCCAAAGAGCATCATAACAGTGTGGCTCATTTCCTTGAATCACGAGGGATGATAGAAGATGCTCTTGAAGTAGCTACTGACCCTGAGTACAGATTTGATCTATCAATACAGCTTGGAAAACTAGATGTTGCAAAGAGTATTGCAATAGAATTACAGAGCGAGCCTAAATGGAAGCAGTTGGGAGAATTAACTATGTCTACTGGAAAGTTAGAAATGGCTGAGGAATGTTTGAAGTATGCAATGGATTTGAGTGGCTTGTTACTGCTATATTCTTCTTTAGGAGATGCTGAAGGAATATCAAAACTTGCAATCCTTGCTAAGGAGCAAGGGAAAAACAATGTTGCATTCCTTTGCTTATTTATGTTGGGTAAATTAGAAGACTGCCTTCAACTGTTGGTAGAAAGCAATCGAATTCCGGAGGCAGCTTTAATGGCTCGATCTTATCTCCCAAGTAAGGTCTCAGAGATAGTGGCAATTTGGAGAAAAGACCTCAATAAGGTTAATCCAAAAGCTGCTGAATCATTGGCTGATCCTGAAGAATATCCAAATTTGTTTGAAGATTGGCAGGTTGCACTAGCTGTCGAATCTAAAGCTGTGGAAACAAGGAATGTGTACCCTCCTGCGGAGCAGTACGTCAACCATGCTGACAAATCACAAATTACCCTTGTTGAAGCCTTTAGAAACATGCAGATTGAGGAAGGAGAGGAGCATCTGGAGAATGGGGACTCTACTCATGAGTTGACAGAACAAAGTGGAGAAGAGCACTACACAGAGGATCAGGAGGAACAGAATGGAGAGGAAGGAAGCCAAGAGGAGGCAGTTGTAGTGGATGCAGATTCTACAGATGGTGCAGTACTCGTTAATGCAATTGGTTGGGGTGGTGTGAAAATCGAAATTTTGTCTCTGTGCTTGCACCACATCACTAGGTTCCATCAAGACAGTCTATTCCAGCTTCTGGGATATTTTATGAGGTCTTCTCAAGtgagtatattgctattgctgctgctatctcttcctctctccgcactctccatcgttttaggaatatcacaccaattcgtgaaatcgaaggattccgacagaatcgtacgaattattgttcattgtttgcctCTACTGTTGTGCTCCAACTTGGTAAACTAG 2985 0.394 MPLRLEIKRKLAQRSERVKCVDLHPTEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFIARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWICTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHSTTYRLENTLNYGLERVWAIGYLKSSRRVVIGYDEGTIMVKLGREVPVASMDNSGKIIWSKHNEIQTVNIKSVGADVEVADGERLPLAVKELGTCDLYPQNLKHNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSEGEYAVRESTSKIKIFSKNFQEKRSVRPTFSAERIFGGTLLAMCSNDFICFYDWAECRLIYRIDVNVKNLYWADSGDLVTIASDTSFYILKYNRDVVVSHLDSGRPVDDEGVEDAFELLHEMNERVRTGIWVGDCFIYNNTSWRLNYCVGGEVTTMFHLDRPMYLLGYLANQSRVYLIDKEFNVMGYTLLLSLIEYKTLVMRGDLERANDILPSIPKEHHNSVAHFLESRGMIEDALEVATDPEYRFDLSIQLGKLDVAKSIAIELQSEPKWKQLGELTMSTGKLEMAEECLKYAMDLSGLLLLYSSLGDAEGISKLAILAKEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLNKVNPKAAESLADPEEYPNLFEDWQVALAVESKAVETRNVYPPAEQYVNHADKSQITLVEAFRNMQIEEGEEHLENGDSTHELTEQSGEEHYTEDQEEQNGEEGSQEEAVVVDADSTDGAVLVNAIGWGGVKIEILSLCLHHITRFHQDSLFQLLGYFMRSSQVSILLLLLLSLPLSALSIVLGISHQFVKSKDSDRIVRIIVHCLPLLLCSNLVN 994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00133 994 PRINTS G protein beta WD-40 repeat signature 202 216 IPR020472 -
Gma15g00133 994 PRINTS G protein beta WD-40 repeat signature 158 172 IPR020472 -
Gma15g00133 994 PRINTS G protein beta WD-40 repeat signature 244 258 IPR020472 -
Gma15g00133 994 PANTHER COATOMER SUBUNIT BETA' 1 876 - -
Gma15g00133 994 PIRSF Beta'-COP 2 889 IPR016453 -
Gma15g00133 994 ProSiteProfiles Trp-Asp (WD) repeats profile. 138 180 IPR001680 GO:0005515
Gma15g00133 994 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 138 172 - -
Gma15g00133 994 ProSiteProfiles Trp-Asp (WD) repeats profile. 225 266 IPR001680 GO:0005515
Gma15g00133 994 ProSiteProfiles Trp-Asp (WD) repeats profile. 181 224 IPR001680 GO:0005515
Gma15g00133 994 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 225 256 - -
Gma15g00133 994 SUPERFAMILY WD40 repeat-like 3 297 IPR036322 GO:0005515
Gma15g00133 994 SUPERFAMILY WD40 repeat-like 227 500 IPR036322 GO:0005515
Gma15g00133 994 CDD WD40 17 297 - -
Gma15g00133 994 Gene3D - 590 798 - -
Gma15g00133 994 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 181 218 - -
Gma15g00133 994 SMART WD40_4 4 43 IPR001680 GO:0005515
Gma15g00133 994 SMART WD40_4 174 215 IPR001680 GO:0005515
Gma15g00133 994 SMART WD40_4 46 85 IPR001680 GO:0005515
Gma15g00133 994 SMART WD40_4 218 257 IPR001680 GO:0005515
Gma15g00133 994 SMART WD40_4 88 127 IPR001680 GO:0005515
Gma15g00133 994 SMART WD40_4 131 171 IPR001680 GO:0005515
Gma15g00133 994 PANTHER COATOMER 1 876 - -
Gma15g00133 994 MobiDBLite consensus disorder prediction 849 872 - -
Gma15g00133 994 Pfam Coatomer WD associated region 319 763 IPR006692 GO:0005198|GO:0006886|GO:0016192|GO:0030117
Gma15g00133 994 Gene3D - 11 300 IPR015943 GO:0005515
Gma15g00133 994 MobiDBLite consensus disorder prediction 849 887 - -
Gma15g00133 994 ProSiteProfiles Trp-Asp (WD) repeats profile. 95 127 IPR001680 GO:0005515
Gma15g00133 994 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 95 127 - -
Gma15g00133 994 Pfam WD domain, G-beta repeat 91 127 IPR001680 GO:0005515
Gma15g00133 994 Pfam WD domain, G-beta repeat 177 215 IPR001680 GO:0005515
Gma15g00133 994 Pfam WD domain, G-beta repeat 220 256 IPR001680 GO:0005515
Gma15g00133 994 Pfam WD domain, G-beta repeat 134 171 IPR001680 GO:0005515
Gma15g00133 994 Pfam WD domain, G-beta repeat 18 43 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00133 Gma-Chr15 1118249 1132111 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00133 51 292 Miscellaneous Gene Families AT5G08390 25.000 1.28e-18 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00133 K17302 - gmx:100804239 1815.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00133 15 1118249 1132111 Gma15g00133 15 1118249 1132111 ECH
Gma13g03221 13 46295112 46304567 Gma15g00133 15 1118249 1132111 GST
Gma15g00133 15 1118249 1132111 Gma07g00325 07 2792316 2804604 PCT
Gma15g00133 15 1118249 1132111 Gma08g01898 08 17044367 17054102 PCT
Gma07g00325 07 2792316 2804604 Gma15g00133 15 1118249 1132111 PCT
Gma08g01898 08 17044367 17054102 Gma15g00133 15 1118249 1132111 PCT