Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g03221 ATGGCAAATCAGTTGAATTTAAAGCACAATCCAAATGGGAGGTTTGTTGTTGTGTGTGGAGATGGTGAGTACATTATATACACTGCATTGGCATGGAGAAATAGGTCATTTGGTTCAGCACTGGAATTTGTTTGGTCTTCTGAGGGAGAATATGCTGTCAGAGAAAGTACATCAAAGATTAAAATTTTCAGCAAAAATTTCCAGGAAAAGAGGAGTGTCCGACCAACATTTTCAGCTGAAAGAATATTTGGTGGCACTCTACTGGCGATGTGCTCCAACGATTTCATCTGCTTTTATGACTGGGCTGAATGCAGGTTGATCTATCGCATTGATGTCAATGTGAAAAACCTCTACTGGGCTGACAGTGGTGATCTAGTAACAATTGCTAGCGATACATCATTCTACATTCTGAAGTACAATCGTGATGTTGTTGTATCACATTTAGATAGTGGAAGACCTGTAGATGATGAAGGTGTTGAAGATGCTTTTGAGCTCTTACATGAAATGAATGAACGTGTCAGAACAGGCATCTGGGTTGGGGATTGCTTTATCTACAACAATTCCTCTTGGAGACTTAATTACTGTGTTGGTGGTGAGGTAACTACGATGTTTCATTTGGACCGCCCCATGTACTTGTTGGGATATCTTGCAAACCAAAGTCGTGTTTATTTGATTGACAAAGAGTTTAATGTTATGGGATACACACTGCTTTTAAGCTTGATTGAGTACAAGACACTTGTGATGCGTGGTGATTTGGAAAGGGCCAATGAAATTCTACCATCAATCCCCAAAGAGCATCATAACAGTGTGGCTCATTTTCTGGAATCACGAGGTATGATAGAAGATGCCCTTGAAGTAGCTACTGACCCTGACTACAGATTTGATCTAGCAATACAGCTTGGAAAACTAGATGTTGCAAAGAGTATTGCAATAGAATTGCAGAGCGAGCCTAAATGGAAGCAATTGGGAGAATTAGCTATGTCTACTGGAAAGTTAGAAATGGCTGAGGAATGTTTGAAGTATGCAATGGATTTGAGTGGCTTGTTACTGCTATATTCTTCTTTAGGAGATGCTGAAGGAATATCAAAACTTGCAATCCTTGCCAAGGAGCAAGGGAAAAACAATGTTGCATTCCTTTGCTTATTTATGTTGGGTAAATTAGAAGACTGCCTTCAACTGTTGGTAGAAAGCAATCGAATTCCAGAGGCAGCTTTAATGGCTCGATCTTATCTCCCAAGTAAGGTCTCAGAGATAGTGGCAATTTGGAGAAAAGACCTCAATAAGGTCAATCCAAAAGCTGCTGAATCATTGGCTAATCCTGAAGAATATCCAAATTTGTTTGAAGATTGGCAAGTTGCACTAGCTGTCGAATCTAAAGCTGTGGAAACAAGGAATGTGTACCCTCCTGCGGAGCAGTACGTCAACCATGCTGACAAATCACACATTACCCTTGTTGAAGCTTTTAGAAGCATGCAGATTGAGGAAGGAGAGGAGCATCTGGAGAATGGGGACTCTACTCATGAGTTGACTGAACGAAATGGAGAAGAGCACTACACAGAGGAGCAGGAGGAACAGAATGGAGAGGAAGGAAGCCAAGAGGAGGCAGTTGTAGTGGATGCAGATTCTACAGATGGTGCAGTACTCGTTAATGGTAACGAGGCTGACGAAGAGTGGGGTACGAATAATGAAGGAGCCCCTGCTTGCGCCACATCACTAGGTCCCATCAAGACAGTTGGTTCCAGCTTCTGGGATTTCTATCTGAGGTCTTCTCAAGGTGCCACGAAGAGATTTTATGGACTGGTTGTTTGTTTCCTGGTGTTGTGGTTTTGTAGTGCCCTGAATTTTGTCATTTTGCGCGTGctatgtaagtatattgctgccgctatctcttccctctctccgcactcactcttcatcgtttttaggaatatcacgattttcgtttcgccaattcgtgaaatcgaaagattcccacagaattgtacgaattattgttcatttttttgtctCTACTGTCGTGCTCCAACTTGGTAA 2034 0.3899 MANQLNLKHNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSEGEYAVRESTSKIKIFSKNFQEKRSVRPTFSAERIFGGTLLAMCSNDFICFYDWAECRLIYRIDVNVKNLYWADSGDLVTIASDTSFYILKYNRDVVVSHLDSGRPVDDEGVEDAFELLHEMNERVRTGIWVGDCFIYNNSSWRLNYCVGGEVTTMFHLDRPMYLLGYLANQSRVYLIDKEFNVMGYTLLLSLIEYKTLVMRGDLERANEILPSIPKEHHNSVAHFLESRGMIEDALEVATDPDYRFDLAIQLGKLDVAKSIAIELQSEPKWKQLGELAMSTGKLEMAEECLKYAMDLSGLLLLYSSLGDAEGISKLAILAKEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLNKVNPKAAESLANPEEYPNLFEDWQVALAVESKAVETRNVYPPAEQYVNHADKSHITLVEAFRSMQIEEGEEHLENGDSTHELTERNGEEHYTEEQEEQNGEEGSQEEAVVVDADSTDGAVLVNGNEADEEWGTNNEGAPACATSLGPIKTVGSSFWDFYLRSSQGATKRFYGLVVCFLVLWFCSALNFVILRVLCKYIAAAISSLSPHSLFIVFRNITIFVSPIREIERFPQNCTNYCSFFCLYCRAPTW 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g03221 677 SUPERFAMILY WD40 repeat-like 7 141 IPR036322 GO:0005515
Gma13g03221 677 Pfam Coatomer WD associated region 6 411 IPR006692 GO:0005198|GO:0006886|GO:0016192|GO:0030117
Gma13g03221 677 PANTHER COATOMER 12 523 - -
Gma13g03221 677 PANTHER COATOMER SUBUNIT BETA' 12 523 - -
Gma13g03221 677 MobiDBLite consensus disorder prediction 497 520 - -
Gma13g03221 677 MobiDBLite consensus disorder prediction 497 535 - -
Gma13g03221 677 Gene3D - 238 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g03221 Gma-Chr13 46295112 46304567 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g03221 K17302 - gmx:106794271 1098.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g03221 13 46295112 46304567 Gma13g03221 13 46295112 46304567 ECH
Gma13g03221 13 46295112 46304567 Gma15g00133 15 1118249 1132111 GST
Gma13g03221 13 46295112 46304567 Gma07g00325 07 2792316 2804604 PCT
Gma13g03221 13 46295112 46304567 Gma08g01898 08 17044367 17054102 PCT
Gma07g00325 07 2792316 2804604 Gma13g03221 13 46295112 46304567 PCT
Gma08g01898 08 17044367 17054102 Gma13g03221 13 46295112 46304567 PCT