Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00325 ATGGCAGTGGTGGGACATGGGCGACATCGAGTTTGTAGTCCAGAAGTGAGGGTGCTTGGGGGATGCAGGGAAGAGGGAGAAAATGTGTTAGGGCATTCCCCCTTTGTTTTCCTTCGATCATCATATTTGCACTCTCAACTCTGCACTGCAAAGCTCGTCGCGTTCCTCTCTCTCTCTCTGAGCTCGATTTATTGGGCTCTTCGAATTCGGTTCCCGATTTCCGACGAGTTCTATCATTCACTTCAATCTTCGGAAATGCCTCTCAGACTCGAAATCAAGCGAAAGCTTGCGCAAAGATCAGAGAGAGTAAAGTCTGTGGATCTACATCCAACAGAACCATGGATTCTAGCAAGTTTGTACTCTGGAACTGTCTGTATCTGGAACTACCAATCTCAGACCATGGCCAAGTCTTTTGAGGTTACTGAGTTACCAGTTAGGTCAGCCAAGTTTATTGCACGCAAACAGTGGGTTGTTGCAGGGGCAGATGATATGTTTATTCGTGTATATAATTACAACACAATGGATAAAGTTAAAGTATTTGAGGCACATACAGATTACATTAGGTGTGTGGCAGTTCATCCTACCCTTCCATATGTGTTGTCATCATCTGATGACATGCTCATAAAGCTTTGGGATTGGGAAAAGGGCTGGATCTGTACCCAGATATTTGAGGGACATTCTCATTATGTCATGCAAGTGACATTTAATCCTAAAGACACAAACACCTTTGCCAGTGCATCTCTTGATCGCACCATAAAGATTTGGAATCTTGGCTCTCCTGACCCCAATTTTACATTGGATGCGCATCAAAAAGGAGTGAATTGTGTTGATTACTTTACAGGTGGTGACAAGCCTTATCTAATAACTGGTTCTGATGATCACACTGCCAAGGTATGGGATTATCAAACCAAAAGTTGTGTCCAGACTCTAGAAGGTCACACACACAATGTATCTGCTGTATGCTTTCATCCTGAACTACCTATAATCATTACTGGCTCTGAGGATGGCACAGTGCGCATTTGGCATTCAACAACTTATAGGCTTGAGAACACATTGAACTATGGTCTTGAAAGAGTTTGGGCTATTGGATATCTGAAGGGTTCACGCCGGGTTGTGATAGGCTATGATGAAGGTACTATTATGGTCAAACTTGGCCGAGAAGAACCTGTAGCCAGCATGGATAACAGTGGGAAAATAATTTGGGCTAAGCATAATGAAATTCAAACTGTCAATATAAGAAGTGTAGGAGCAGATGTGGAGATTGCTGATGGAGAAAGGCTACCATTGGCTGTTAAGGAGTTGGGCACCTGTGATCTCTATCCACAAAGTTTAAGGCACAATCCGAATGGGAGGTTTGTTGTTGTTTGTGGAGATGGGGAGTATATTATATACACTGGTTTGGCATGGAGAAATAGATCATTTGGTTCAGCTCTGGAATTTGTTTGGTCTTCAGATGGGGAGTATGCTGTAAGAGAAAGTACATCGAAGGTCAAAATTTTCAGCAAAAATTTCCAGGAAAAGAAGAGTATCCGACCAACTTTTTCAGCTGAACGAATATTTGGTGGCACTGTATTGGCAATGTGCTCAAATGATTTCATCTGCTTTTATGATTGGGCTGAATGCAGGTTGATTCGTCGTATTGATGTTAATGTTAAAAACCTCTACTGGGCTGATAGCGGTGATCTAGTGACGATTGCTAGTGATACATCATTCTATATCCTGAAGTACAATCATGATGTTGTTGCATCATATTTAGATAGTGGAGGGCCTGTAGATGAGCAAGGTGTTGAAGATGCCTTTGAGCTCCTTCATGAAATGAATGAACGTGTCAGGACAGGGATCTGGGTTGGGGATTGTTTTATCTACAGCAATTCTTCTTGGAGGCTTAACTATTATGTTGGTGGTGAGGTTACTACAATGTTTCATTTGGACCGTCCTATGTACTTGTTGGGATATCTTGCCAGCCAAAGTAAGGTCTATTTGATAGACAAAGAATTTAATGTTATGGGATACACACTACTTTTAAGTTTGATTGAATACAAGACACTAGTCATGCGCGGTGATTTGGAAAGGGCCAATGAAATTCTACCATCAATTCCTAAAGAGTATCATAACAGTGTGGCTCGTTTCCTGGAATCACGAGGGATGATAGAGGATGCTCTTGAAGTAGCTACTGACCCTGACTATAGGTTTGATCTAGCCATACAGCTTGGAAGATTAGAGGTTGCTAAGGGTATTGCTTCTGAAGTGCAGAGTGAGTCCAAATGGAAGCAATTGGGAGAATTAGCCATGTCTACTGGAAAGTTAGAAATGGCTGAAGAGTGTTTAAAACACGCAACAGATTTGAGTGGGTTATTGCTGCTATATTCTTCTTTAGGAGATGCTGAAGGAATATCAAAACTTGCAACTCTTGCTAAAGAGCAAGGGAAGAATAATGTTGCATTCCTTTGCTTATTCATGTTGGGTAAACTTGAGGACTGCCTTCAACTTTTGGTAGAAAGCAATCGGATTCCAGAGGCTGCTTTAATGGCTCGATCCTATCTCCCAAGCAAGGTCTCAGAGATAGTGGCAATTTGGAGAAAAGATCTCAGTAAGGTTAATCCAAAAGCTGCTGAATCATTGGCTGATCCTGAGGAATATCCTAATTTGTTTGATGATTGGCAAGTTGCACTAGCTGTTGAATCTAAAGCTACGGAAGCAAGAGGTGTTTACCCTCCTGCATCGGAGTATGTGAACCAGGCTGATAAATCACATATCACCCTTGTGGAAGCTTTCAGAAACATGCAGATAGAAGAAGGGGATCAGCCTCTTGAGAACGGGGACTCTAACCATGAGTTGACTGAACAAAATGGAGAAGAGCACTATACAGAGGAACATGAGGAGCACCAGGAACAAAATGGAGAAGAAGGAAGCCAAGAGGAGGCAGTTGTAGTGGATGCCGATTCTACTGATGGTGCAGTCCTTGTCAATGGTAACGGGGCAGATGAAGAGTAG 2994 0.4235 MAVVGHGRHRVCSPEVRVLGGCREEGENVLGHSPFVFLRSSYLHSQLCTAKLVAFLSLSLSSIYWALRIRFPISDEFYHSLQSSEMPLRLEIKRKLAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFIARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWICTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHSTTYRLENTLNYGLERVWAIGYLKGSRRVVIGYDEGTIMVKLGREEPVASMDNSGKIIWAKHNEIQTVNIRSVGADVEIADGERLPLAVKELGTCDLYPQSLRHNPNGRFVVVCGDGEYIIYTGLAWRNRSFGSALEFVWSSDGEYAVRESTSKVKIFSKNFQEKKSIRPTFSAERIFGGTVLAMCSNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVTIASDTSFYILKYNHDVVASYLDSGGPVDEQGVEDAFELLHEMNERVRTGIWVGDCFIYSNSSWRLNYYVGGEVTTMFHLDRPMYLLGYLASQSKVYLIDKEFNVMGYTLLLSLIEYKTLVMRGDLERANEILPSIPKEYHNSVARFLESRGMIEDALEVATDPDYRFDLAIQLGRLEVAKGIASEVQSESKWKQLGELAMSTGKLEMAEECLKHATDLSGLLLLYSSLGDAEGISKLATLAKEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLSKVNPKAAESLADPEEYPNLFDDWQVALAVESKATEARGVYPPASEYVNQADKSHITLVEAFRNMQIEEGDQPLENGDSNHELTEQNGEEHYTEEHEEHQEQNGEEGSQEEAVVVDADSTDGAVLVNGNGADEE 997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00325 997 ProSiteProfiles Trp-Asp (WD) repeats profile. 266 309 IPR001680 GO:0005515
Gma07g00325 997 ProSiteProfiles Trp-Asp (WD) repeats profile. 310 351 IPR001680 GO:0005515
Gma07g00325 997 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 310 341 - -
Gma07g00325 997 PRINTS G protein beta WD-40 repeat signature 287 301 IPR020472 -
Gma07g00325 997 PRINTS G protein beta WD-40 repeat signature 329 343 IPR020472 -
Gma07g00325 997 PRINTS G protein beta WD-40 repeat signature 243 257 IPR020472 -
Gma07g00325 997 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 223 257 - -
Gma07g00325 997 ProSiteProfiles Trp-Asp (WD) repeats profile. 180 212 IPR001680 GO:0005515
Gma07g00325 997 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 180 212 - -
Gma07g00325 997 PIRSF Beta'-COP 87 979 IPR016453 -
Gma07g00325 997 SUPERFAMILY NHL repeat 306 577 - -
Gma07g00325 997 Pfam Coatomer WD associated region 404 848 IPR006692 GO:0005198|GO:0006886|GO:0016192|GO:0030117
Gma07g00325 997 ProSiteProfiles Trp-Asp (WD) repeats profile. 223 265 IPR001680 GO:0005515
Gma07g00325 997 PANTHER COATOMER SUBUNIT BETA' 86 958 - -
Gma07g00325 997 SUPERFAMILY WD40 repeat-like 87 382 IPR036322 GO:0005515
Gma07g00325 997 Gene3D - 675 883 - -
Gma07g00325 997 MobiDBLite consensus disorder prediction 937 969 - -
Gma07g00325 997 MobiDBLite consensus disorder prediction 933 997 - -
Gma07g00325 997 Pfam WD domain, G-beta repeat 305 341 IPR001680 GO:0005515
Gma07g00325 997 Pfam WD domain, G-beta repeat 176 212 IPR001680 GO:0005515
Gma07g00325 997 Pfam WD domain, G-beta repeat 262 300 IPR001680 GO:0005515
Gma07g00325 997 Pfam WD domain, G-beta repeat 219 256 IPR001680 GO:0005515
Gma07g00325 997 SMART WD40_4 173 212 IPR001680 GO:0005515
Gma07g00325 997 SMART WD40_4 89 128 IPR001680 GO:0005515
Gma07g00325 997 SMART WD40_4 216 256 IPR001680 GO:0005515
Gma07g00325 997 SMART WD40_4 303 342 IPR001680 GO:0005515
Gma07g00325 997 SMART WD40_4 131 170 IPR001680 GO:0005515
Gma07g00325 997 SMART WD40_4 259 300 IPR001680 GO:0005515
Gma07g00325 997 Gene3D - 96 385 IPR015943 GO:0005515
Gma07g00325 997 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 266 303 - -
Gma07g00325 997 CDD WD40 102 382 - -
Gma07g00325 997 PANTHER COATOMER 86 958 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00325 Gma-Chr7 2792316 2804604 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00325 136 394 Miscellaneous Gene Families AT5G08390 24.906 1.05e-18 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00325 K17302 - gmx:100797508 1803.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00325 07 2792316 2804604 Gma07g00325 07 2792316 2804604 ECH
Gma07g00325 07 2792316 2804604 Gma08g01898 08 17044367 17054102 GST
Gma13g03221 13 46295112 46304567 Gma07g00325 07 2792316 2804604 PCT
Gma15g00133 15 1118249 1132111 Gma07g00325 07 2792316 2804604 PCT
Gma07g00325 07 2792316 2804604 Gma13g03221 13 46295112 46304567 PCT
Gma07g00325 07 2792316 2804604 Gma15g00133 15 1118249 1132111 PCT