Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00120 ATGCCTTCACTCTCAGAAGCCTACCGATCCCACCCCGTGCACGTTCAACACAAGCACCCTGACTTAAACTCCCTACAAGAACTCCCCGAGTCTTACACTTGGACACACCATGGCCATGATGATCACACTAATTCCCCTGCTTCCAACGAGAGTGTCCCCGTTATTGATCTCAATGACCCAAATGCTTCAAAGTTGATACACCATGCATGCACAACTTGGGGAGCGTACCAAGTGCTGAACCATGGCATACCCATGAGCCTCCTCCAAGACATTCAATGGGTTGGGGAGACCCTATTCTCTCTCCCTTCTCACCAAAAACACAAAGCAGCTCGTTCCCCTGACGGTGTTGATGGCTATGGCCTCGCTCGCATCTCTTCCTTCTTCCCCAAACTCATGTGGTCTGAAGGCTTCACAATTGTTGGATCCCCTCTTGAGCATTTTCGCCAACTCTGGCCCCAAGATTACGACAAATACTGTGATTTCGTCATGCAATATGACGAAGCCATGAAAAAGCTAGTGGGAAAGCTGATGTTGCTCATGTTGGATTCTCTGGGTATTACAAAGGAAGACCTTAAATGGGCTGGCTCAAAAGGCCAATTCGAAAAGACTTGTGCTGCCTTGCAATTGAATTCATACCCGACTTGTCCGGATCCGGATCGGGCCATGGGTCTAGCCGCCCACACCGACTCCACCCTTCTCACAATCCTTTACCAAAACAACATAAGCGGGTTGCAGGTTCACCGAAAAGGCGTCGGGTGGGTGACGGTGCCACCACTCTCCGGCGGACTTGTGATCAATGTAGGCGACCTCCTCCACATATTGTCGAACGGGTTGTACCCGAGTGTGCTCCACCGGGTCTTAGTGAACCGGATCCAGCGAAGGCTTTCAGTTGCGTATTTATGTGGGCCCCCTCCAAATGTGGAGATATGTCCACATGCGAAGTTAGTGGGCCCAAATAAGCCTCCCCTTTATAAGGCAGTGACTTGGAATGAGTACCTTGGCACCAAAGCAAAGCATTTTAACAAGGCACTCTCAACTGTTCGGCTTTGTGCACCTAGCTAG 1062 0.5047 MPSLSEAYRSHPVHVQHKHPDLNSLQELPESYTWTHHGHDDHTNSPASNESVPVIDLNDPNASKLIHHACTTWGAYQVLNHGIPMSLLQDIQWVGETLFSLPSHQKHKAARSPDGVDGYGLARISSFFPKLMWSEGFTIVGSPLEHFRQLWPQDYDKYCDFVMQYDEAMKKLVGKLMLLMLDSLGITKEDLKWAGSKGQFEKTCAALQLNSYPTCPDPDRAMGLAAHTDSTLLTILYQNNISGLQVHRKGVGWVTVPPLSGGLVINVGDLLHILSNGLYPSVLHRVLVNRIQRRLSVAYLCGPPPNVEICPHAKLVGPNKPPLYKAVTWNEYLGTKAKHFNKALSTVRLCAPS 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00120 353 SUPERFAMILY Clavaminate synthase-like 16 340 - -
Gma15g00120 353 Pfam non-haem dioxygenase in morphine synthesis N-terminal 52 152 IPR026992 -
Gma15g00120 353 PANTHER GIBBERELLIN 3-BETA-DIOXYGENASE 1-LIKE 3 341 - -
Gma15g00120 353 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 3 341 - -
Gma15g00120 353 MobiDBLite consensus disorder prediction 1 54 - -
Gma15g00120 353 Gene3D - 15 334 IPR027443 -
Gma15g00120 353 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 202 303 IPR005123 -
Gma15g00120 353 Pfam 2OG-Fe(II) oxygenase superfamily 207 303 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00120 Gma-Chr15 980771 982299 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00120 47 344 Glycosyltransferase AT5G59530 30.435 1.09e-35 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00120 K04124 - gmx:100798572 727.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00120 15 980771 982299 Gma15g00120 15 980771 982299 ECH
Gma13g03235 13 46425320 46427463 Gma15g00120 15 980771 982299 GST
Gma15g00120 15 980771 982299 Gma07g00317 07 2692145 2695048 PCT
Gma15g00120 15 980771 982299 Gma08g01907 08 17176709 17178809 PCT
Gma07g00317 07 2692145 2695048 Gma15g00120 15 980771 982299 PCT
Gma08g01907 08 17176709 17178809 Gma15g00120 15 980771 982299 PCT