Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00317 ATGCCTTCTCTCTCCGAAGCCTTTAGAGGTCACCCCGTGTACCTTCATCACAAACACTCCGACTTCAACTCACTTCAAGAACTCCCTGACTCTTACTCTTGGACACAACCCCATGATCACCATCTCCCAAATTACCCTTCCAACAATAAGACCAAGATCTTTGTCCCCGTAATCGATTTGAACCACCCAAATGCTCCAAACCTCATAGGCCATGCATGCAAAACATGGGGTGTGTTCCAAGTGGTGAACCATGACATCCCCATGAGCCTCTTCAGTGACATTCAGAGGGCTAGTCTTGCGTTATTCTCCCTTCCCCTTCACCAGAAGCTCAAAGCAGCTCGCTCCCCCGACGGCGTCTCCGGCTATGGCCGCGCTCGCATCTCCTCCTTCTTCCCCAAGCTCATGTGGTCTGAGTGCTTCACAATTCTCGATTCCCCTCTTGATCTTTTCCTCAAACTCTGGCCACAAGACTATGCTAAATACTGTGATATTGTCGTGGAATATGAAGCAGCCATGAAAAAGCTAGCAGCGAAATTAATGTGCCTCATGTTGGCTTCCCTTGGAATTACAAAGGAAGACACTAAATGGGCTGGGCCAAAAGGAGAATTCAATGGGGCTTGTGCGGCCTTGCACTTGAATTCTTACCCGAGTTGCCCGGATCCGGATCGAGCCATGGGTCTGGCCGCACACACCGACTCCACTCTCCTCACAATCCTGCACCAAAACAATGTCAATGGGCTTCAAGTTCTCAAGGAAGGAGAAGGGTGGGTGGCAGTGCCGCCGCTTCACGGAGGGCTCGTGATTAACGTTGGCGATCTGCTCCACATTTTGTCAAACGGGTTGTACCCGAGTGTGCTCCATCGGGTTCGGGTGAACCGAACCCAACAGCGGTTCTCGGTTGCTTATCTATATGGGCCCCCAGCAAACGTCCAAATCAGTCCACATGTCAAGTTGGTGGGCCCAACAAGGCCCGCTCTTTATCGACCAGTGACTTGGAACGAGTACCTTGGCACCAAAGCAAACCTTTTTAATAAGGCTCTttcagcgAACGCCGTTCGACCATTTGTGGTTGTCTCATTGATCGACGACGTGAAGTTTTTTTTTTAG 1107 0.5023 MPSLSEAFRGHPVYLHHKHSDFNSLQELPDSYSWTQPHDHHLPNYPSNNKTKIFVPVIDLNHPNAPNLIGHACKTWGVFQVVNHDIPMSLFSDIQRASLALFSLPLHQKLKAARSPDGVSGYGRARISSFFPKLMWSECFTILDSPLDLFLKLWPQDYAKYCDIVVEYEAAMKKLAAKLMCLMLASLGITKEDTKWAGPKGEFNGACAALHLNSYPSCPDPDRAMGLAAHTDSTLLTILHQNNVNGLQVLKEGEGWVAVPPLHGGLVINVGDLLHILSNGLYPSVLHRVRVNRTQQRFSVAYLYGPPANVQISPHVKLVGPTRPALYRPVTWNEYLGTKANLFNKALSANAVRPFVVVSLIDDVKFFF 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00317 368 PANTHER GIBBERELLIN 3-BETA-DIOXYGENASE 1-LIKE 3 347 - -
Gma07g00317 368 Pfam non-haem dioxygenase in morphine synthesis N-terminal 55 147 IPR026992 -
Gma07g00317 368 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 205 306 IPR005123 -
Gma07g00317 368 SUPERFAMILY Clavaminate synthase-like 15 341 - -
Gma07g00317 368 Gene3D - 19 343 IPR027443 -
Gma07g00317 368 Pfam 2OG-Fe(II) oxygenase superfamily 210 306 IPR044861 -
Gma07g00317 368 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 3 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00317 Gma-Chr7 2692145 2695048 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00317 69 351 Glycosyltransferase AT5G59530 30.068 1.31e-33 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00317 K04124 - gmx:100795921 716.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00317 07 2692145 2695048 Gma07g00317 07 2692145 2695048 ECH
Gma07g00317 07 2692145 2695048 Gma08g01907 08 17176709 17178809 GST
Gma13g03235 13 46425320 46427463 Gma07g00317 07 2692145 2695048 PCT
Gma15g00120 15 980771 982299 Gma07g00317 07 2692145 2695048 PCT
Gma07g00317 07 2692145 2695048 Gma13g03235 13 46425320 46427463 PCT
Gma07g00317 07 2692145 2695048 Gma15g00120 15 980771 982299 PCT