Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g02102 ATGGACGACGAAGTGCAGCAGATCTTCAACAAGTTCGACAAGAACGGCGACGGAAAAATCTCTATGGCAGAGCTGAAGGACATGCTCTCCGCGCTCGGATCCAAAACGACGGACGAGGAGTTGAAACGCATGATCGAGGAGCTCGACCAAAACGGCGACGGTTTCATTGACCTCAAGGAGTTCGCGGACTTTCACTGCAATGGCGGCGCCGGAAAGGACGACTCGAAGGAGCTCCGCGACGCGTTCGATCTCTACGACGTCGACAAGAACGGCCTCATCTCCGCGAAGGAGTTGCACCACGTGCTCCGGAATCTCGGCGAGAAGTGCTCCCTCAGTGACTGCCGGAGAATGATCAGCAACGTCGACGGCGACGGCGACGGCAACGTCAACTTCGAGGAATTCAAAAAGATGATGACTCGCTCTTAA 426 0.5563 MDDEVQQIFNKFDKNGDGKISMAELKDMLSALGSKTTDEELKRMIEELDQNGDGFIDLKEFADFHCNGGAGKDDSKELRDAFDLYDVDKNGLISAKELHHVLRNLGEKCSLSDCRRMISNVDGDGDGNVNFEEFKKMMTRS 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g02102 141 SUPERFAMILY EF-hand 3 140 IPR011992 -
Gma14g02102 141 PANTHER EF HAND CALCIUM-BINDING FAMILY PROTEIN 1 141 - -
Gma14g02102 141 Gene3D - 75 141 - -
Gma14g02102 141 ProSiteProfiles EF-hand calcium-binding domain profile. 1 35 IPR002048 GO:0005509
Gma14g02102 141 ProSiteProfiles EF-hand calcium-binding domain profile. 73 108 IPR002048 GO:0005509
Gma14g02102 141 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 1 141 - -
Gma14g02102 141 ProSitePatterns EF-hand calcium-binding domain. 13 25 IPR018247 -
Gma14g02102 141 Pfam EF-hand domain pair 77 139 IPR002048 GO:0005509
Gma14g02102 141 Pfam EF-hand domain pair 4 64 IPR002048 GO:0005509
Gma14g02102 141 CDD EFh 4 65 IPR002048 GO:0005509
Gma14g02102 141 ProSitePatterns EF-hand calcium-binding domain. 49 61 IPR018247 -
Gma14g02102 141 ProSitePatterns EF-hand calcium-binding domain. 122 134 IPR018247 -
Gma14g02102 141 SMART efh_1 113 141 IPR002048 GO:0005509
Gma14g02102 141 SMART efh_1 77 105 IPR002048 GO:0005509
Gma14g02102 141 SMART efh_1 4 32 IPR002048 GO:0005509
Gma14g02102 141 SMART efh_1 40 68 IPR002048 GO:0005509
Gma14g02102 141 ProSiteProfiles EF-hand calcium-binding domain profile. 109 141 IPR002048 GO:0005509
Gma14g02102 141 Gene3D - 1 74 - -
Gma14g02102 141 CDD EFh 77 139 IPR002048 GO:0005509
Gma14g02102 141 ProSitePatterns EF-hand calcium-binding domain. 86 98 IPR018247 -
Gma14g02102 141 ProSiteProfiles EF-hand calcium-binding domain profile. 36 71 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g02102 Gma-Chr14 52120488 52125354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g02102 3 139 EF-hand Containing Proteins AT1G18210 56.204 3.69e-51 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g02102 K13448 - gmx:100806182 289.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g02102 14 52120488 52125354 Gma02g02323 02 49328877 49329782 GST
Gma18g00371 18 3253928 3254959 Gma14g02102 14 52120488 52125354 PCT
Gma11g02199 11 37220190 37222752 Gma14g02102 14 52120488 52125354 PCT
Gma14g02102 14 52120488 52125354 Gma18g00371 18 3253928 3254959 PCT
Gma14g02102 14 52120488 52125354 Gma11g02199 11 37220190 37222752 PCT