Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02323 ATGGACGTCGAGGTGCGGCAGATCTTCAACAAGTTCGACAAGAACGGCGACGGAAAAATCTCGGTAACGGAGCTGAAGGACATGCTCGCGGCCCTCGGATCCAAAACGACGGACGAGGAGTTGAAACGCATGATGGAGGAGCTCGACCAGAACGGCGACGGTTTCATCGACCTCAAGGAGTTCGCGGATTTTCACTGCAATGGCGGTGCCGGAAAGGACGACTCGAAGGAGCTCCGCGACGCGTTCGATCTCTACGACGTCGACAAGAACGGCCTCATCTCCGCGAAGGAGTTGCACGACGTGCTCCGGAATCTAGGCGAGAAGTGCTCCCTCAGCGATTGCCGGAGAATGATCAGCAACGTCGACGCTGACGGCGACGGCAACGTTAACTTCGAGGAATTCAAGAAGATGATGACTCGCTCTTAA 426 0.561 MDVEVRQIFNKFDKNGDGKISVTELKDMLAALGSKTTDEELKRMMEELDQNGDGFIDLKEFADFHCNGGAGKDDSKELRDAFDLYDVDKNGLISAKELHDVLRNLGEKCSLSDCRRMISNVDADGDGNVNFEEFKKMMTRS 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02323 141 Gene3D - 76 141 - -
Gma02g02323 141 Pfam EF-hand domain pair 5 64 IPR002048 GO:0005509
Gma02g02323 141 Pfam EF-hand domain pair 77 139 IPR002048 GO:0005509
Gma02g02323 141 ProSiteProfiles EF-hand calcium-binding domain profile. 73 108 IPR002048 GO:0005509
Gma02g02323 141 PANTHER EF HAND CALCIUM-BINDING FAMILY PROTEIN 2 141 - -
Gma02g02323 141 ProSitePatterns EF-hand calcium-binding domain. 13 25 IPR018247 -
Gma02g02323 141 Gene3D - 1 75 - -
Gma02g02323 141 ProSiteProfiles EF-hand calcium-binding domain profile. 36 71 IPR002048 GO:0005509
Gma02g02323 141 CDD EFh 4 65 IPR002048 GO:0005509
Gma02g02323 141 ProSitePatterns EF-hand calcium-binding domain. 49 61 IPR018247 -
Gma02g02323 141 ProSitePatterns EF-hand calcium-binding domain. 122 134 IPR018247 -
Gma02g02323 141 ProSiteProfiles EF-hand calcium-binding domain profile. 1 35 IPR002048 GO:0005509
Gma02g02323 141 SUPERFAMILY EF-hand 4 140 IPR011992 -
Gma02g02323 141 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 2 141 - -
Gma02g02323 141 SMART efh_1 113 141 IPR002048 GO:0005509
Gma02g02323 141 SMART efh_1 77 105 IPR002048 GO:0005509
Gma02g02323 141 SMART efh_1 40 68 IPR002048 GO:0005509
Gma02g02323 141 SMART efh_1 4 32 IPR002048 GO:0005509
Gma02g02323 141 CDD EFh 77 139 IPR002048 GO:0005509
Gma02g02323 141 ProSitePatterns EF-hand calcium-binding domain. 86 98 IPR018247 -
Gma02g02323 141 ProSiteProfiles EF-hand calcium-binding domain profile. 109 141 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02323 Gma-Chr2 49328877 49329782 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02323 74 141 EF-hand Containing Proteins AT1G18210 32.353 1.24e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02323 K13448 - gmx:100796491 287.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g02102 14 52120488 52125354 Gma02g02323 02 49328877 49329782 GST
Gma18g00371 18 3253928 3254959 Gma02g02323 02 49328877 49329782 PCT
Gma11g02199 11 37220190 37222752 Gma02g02323 02 49328877 49329782 PCT
Gma02g02323 02 49328877 49329782 Gma18g00371 18 3253928 3254959 PCT
Gma02g02323 02 49328877 49329782 Gma11g02199 11 37220190 37222752 PCT