Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02199 ATGGATGAAGAAGTGCGCAAGATCTTCAGCAAGTTCGACAAGAACGGCGACGGCAAGATCTCGTGCGCCGAGCTGAAGGAGATGATGGTGGCGCTGGGATCCAAAACGACGTCGGAGGAGGTGAAGCGCATGATGGCGGAGCTTGATCGGAACGGCGACGGCTACATTGACCTGAAGGAGTTCGGCGAGTTCCATTGCGGCGGCGGCGACGGGAGGGAGCTCCGGGAGGCGTTCGAGCTGTACGATCTGGACAAGAACGGGCTGATCTCGGCGAAGGAGCTGCACTCCGTGATGCGGAGGTTGGGGGAGAAGTGCTCCCTCAGCGACTGCCGGAGGATGATCGGAAACGTGGATGCCGACGGTGACGGCAACGTCAATTTTGAAGAGTTTAAGAAGATGATGACTCGCTCGTAG 414 0.5845 MDEEVRKIFSKFDKNGDGKISCAELKEMMVALGSKTTSEEVKRMMAELDRNGDGYIDLKEFGEFHCGGGDGRELREAFELYDLDKNGLISAKELHSVMRRLGEKCSLSDCRRMIGNVDADGDGNVNFEEFKKMMTRS 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02199 137 Pfam EF-hand domain pair 3 62 IPR002048 GO:0005509
Gma11g02199 137 Pfam EF-hand domain pair 73 135 IPR002048 GO:0005509
Gma11g02199 137 ProSitePatterns EF-hand calcium-binding domain. 82 94 IPR018247 -
Gma11g02199 137 ProSiteProfiles EF-hand calcium-binding domain profile. 105 137 IPR002048 GO:0005509
Gma11g02199 137 ProSiteProfiles EF-hand calcium-binding domain profile. 36 64 IPR002048 GO:0005509
Gma11g02199 137 CDD EFh 4 61 IPR002048 GO:0005509
Gma11g02199 137 Gene3D - 1 67 - -
Gma11g02199 137 PANTHER EF HAND CALCIUM-BINDING FAMILY PROTEIN 1 137 - -
Gma11g02199 137 ProSitePatterns EF-hand calcium-binding domain. 13 25 IPR018247 -
Gma11g02199 137 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 1 137 - -
Gma11g02199 137 ProSiteProfiles EF-hand calcium-binding domain profile. 1 35 IPR002048 GO:0005509
Gma11g02199 137 Gene3D - 70 137 - -
Gma11g02199 137 ProSiteProfiles EF-hand calcium-binding domain profile. 69 104 IPR002048 GO:0005509
Gma11g02199 137 ProSitePatterns EF-hand calcium-binding domain. 118 130 IPR018247 -
Gma11g02199 137 SUPERFAMILY EF-hand 3 136 IPR011992 -
Gma11g02199 137 SMART efh_1 109 137 IPR002048 GO:0005509
Gma11g02199 137 SMART efh_1 73 101 IPR002048 GO:0005509
Gma11g02199 137 SMART efh_1 4 32 IPR002048 GO:0005509
Gma11g02199 137 SMART efh_1 40 68 IPR002048 GO:0005509
Gma11g02199 137 CDD EFh 73 135 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02199 Gma-Chr11 37220190 37222752 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g02199 3 135 EF-hand Containing Proteins AT1G18210 57.895 1.95e-52 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02199 K13448 - gmx:100806813 280.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00371 18 3253928 3254959 Gma11g02199 11 37220190 37222752 GST
Gma11g02199 11 37220190 37222752 Gma14g02102 14 52120488 52125354 PCT
Gma11g02199 11 37220190 37222752 Gma02g02323 02 49328877 49329782 PCT
Gma14g02102 14 52120488 52125354 Gma11g02199 11 37220190 37222752 PCT
Gma02g02323 02 49328877 49329782 Gma11g02199 11 37220190 37222752 PCT