Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g01925 ATGCCGACGCCGGTCAGTGTAGTGAGGCAATGCTTAACCGACGAGGCCGCGCGTGCACTCGACGACGCAGTCGCCGTCGCGCGCCGACGCAGCCACGCTCAGACGACGTCGCTCCACGCCATCTCCGCGCTCCTGGCTCTCCCCTCCTCCGCCCTGCGCGACGCGTGCGGCCGCGCGCGCTCCGGCGCCGGCGCCGGCACCAGCGCCGCCCGATTCTCCGCCGCATACTCCCCGCGCCTCCAGTTCCGCGCCCTGGAGCTCTCCGTCGGCGTGTCCCTCGACCGGCTCCCTTCGTCGAAGTCCACCTCCGCCGGCGAGGAGGAGCCGCCGGTGTCGAACTCTCTCATGGCGGCGATAAAACGCTCTCAGGCGAACCAGCGGCGGCACCCGGAGAGCTTCCACATGTTCCAGCAAAGCCAACAGGGAACAGCATCGACGTCGTTTTTGAAAGTCGAACTAAAGCACTTCGTTTTGTCGATCCTCGATGACCCTATCGTGAGTCGCGTCTTCGCTGAAGCAGGGTTTCGGAGCTGCGATATAAAACTCGCCTTGCTCCAACCGCCTCTGCCTCCGGTTCAGCACCGGTTCAACTGGTCACCTCCGGTTTTCCTCTGCAACCTCGACCCGGCCCAGCCCGACGAAAATATTCGCAGGATCATGGAAGTTCTCGCGAGAAAAAACAAGAGAAACCCTTTACTTATGGGCGTTTATGCAAAGAGTGCTCTAAAGGGTTTCGTTGAGATGGTTCGGAATGGAAGGGGAGGTTCGGCATTAGGTTCGGAGTTGAGGGTGGTTCGTTTGGAGAGGGAGATTGGGGAGTTTGTGAAAAAGGGTGGGAGTGGGGAAGAGAAATTTGGTGTTAGGTTGAAGGAATTGGAACAGCAATGTGAGGGTTCTGGTTCTGGGGTTGTTGTTAGTTTCGGGGAGATTGAGGTTTTTGTAGGGGAAGATGTTGATGTTGATGTTGTAAGGTTCGTTGTTTCGGGTTTAACGAGGTTGTTGGAGATTCGTGGTGAGAAGGTTTCGTTGCTGGGCGTGGCGGAAACTTCTCATGCTTATTCCAAGTTCTTGGGATTGTTTCCCAATGTAGAAAATGATTGGGATCTTCATTTGCTCACTGTCACTTCTGCCACTCCTTCCATGGAAGGACTCTACTCAAAATCCAGCTTGATGGGGTCCTTTGTTCCATTTGGAGGGTTCTTTTCTACACCTGAAATCAGAAGTCCGGTAAGCTGTGCAAACGGGTCTTTTACACGTTGTGACACATGCAATAAAAAATGTGAACAAGAAGTTGCAGATCTTCTGAAGGTAGATCCTTCATCTAGTTATTCAACAAGCTCACACTGGTTACAAAAGGTTGTTAACATGGACGCGCATAGAGGGTCGGACGTGGCAAAGACTAATGAAGAAAACACAAGTTTGAATGATAAAATCTTGGGATTTCAAAAGAAATGGAGTGATATTTGTCAGCGTCTTCATCACACAAGTTCACTACCTCAATTTGATATTTCTCAAACAAGGTCCCAAGCTCCAACAGTTGAGGTTTTACGGTTTGGTCTGGCTTTTAAGGAAAGCAGCAATAAAGACCCATCACACAGTGAATTCCAATATTCTAGTCAAATTTCCTGCATGCCCAAAGAGTTGCATAGTATTTTTCCTTCGAAGCAGTTATCTGTTCCATTACCTTCTGATACAGTCTGCATTAATACTGGAACCGATCATGTTCCAAAAGTTTCAGAGACACTGCAAATTCACATGAACACCCCTTGGGTTGCCCCTTCCCTTATGGCCAATAAGAGTGCACTTGACCACAGATCATCTTCATTCCGTACTCCTGTGACCACAGATTTAGGATTGGGAACGTTATATACATCAACTGCTCAGGATCCAGATACCCCAAAACTACAAGATCAAAGAAAGCATCTTCAGCACCTGTCAGATTCTGTTTCAACTGATTGTGATGGTATGAATGAAAATACTTCTCACCGAATTGCTAGATTTTCCTGCTCTGGTTCAAATTTGGAAGGTAAATTTGATTTAGCAGATTTCAAGTCTCTTGATCGACTTCTCACTGAAAAGGTTGGCTGGCAGGATCAAGCCATATGTGCTATCAGTCAAACTTTGTCCCTTTGTAAATCTGGTGCAGGAAAGCGTAGAGGCTCAAATGGTAGAGCAGACATATGGTTGGCTTTCCTTGGACCCGATAGACTTGGAAAAAGGAAAATTGCTTCAGTTCTTGCAGAGACTATATTTGGAAACCCTGAAAGCCTAATCTCTGTGGATCTTGGCTTCCAGGACAGCTTTTACCCATTGAACTCGGTTTTTGAATACCAAAAATCACGTTGTTATGATGTGCTTAGGAGGAAGACAATTTTGGATTATATTGCTGGGGAGTTGAGTAAAAAGCCACATTCTGTTGTCTTTCTTGAAAATGTAGATAAAGCCGATGTTTTGGTGCAGAATAGTTTGTTGCAGGCAGTAAGAACAGGCAAATTTTCATATTCGCATGGAAGGGTGATTAGCATCAATAACACAATCTTTCTTGTAACCTCAACTGTCTGTAAAGGTAATGGCTCTTTTGTTTTGGAAGAGTCTAAGATGTTTTCTGAGGAAAGAATCCTTGAAGCCAAAAGATGCCAAATGCAATTATTACTTGGACATGCTTCTGAGGATGCCGGAAGAATTGGTAGCACAAATGTTAAGGTTGTACCCGGAAAAGGGTTTTCCAAATCATCATCTCTGAACAAAAGAAAGCAGGCTGATATTAGTGACTCCAAGGAGGGGGCAACAAGCAAGATGCAGAAACAAGACAGTGAGGCATCTCGATCCTATCTTGATCTAAATATGCCTGTAGAGGATGGTGAAGAGGGTGTCAATGATGACCACGAAAGTGAATCCATAACAGAAAACACAGATGCCTGGTTAAGTGATTTCTTTGATCAAATTGATGAGAAAGTGGTGTTTAAGTCATTCAATTTTGATGAGCTTGCTGAGGAAGTATTAAAAAGAATTGGCATGCTATTTCAAAGGACATTTGGTTCAGAGCTTCAGCTGGAAATTGATTATGAGGTAATAACACACATACTTGCTGCTGCTTGGTTATCAGACAAGAAAAATGCAGTTGAGGATTGGGTTGAACATGTTCTTGGCAAAGGCTTTGTTGAAGCTCAGCAGAAGTACCTTCCTGCAGCTCAATATGTAGTAAAACTGGTTAATTGTGAATCCATTTTTGTGGAAGAGCAAGCTCCTGATGTGTGCCTTCCAGCTAGAATTAACACGGACTAA 3285 0.4612 MPTPVSVVRQCLTDEAARALDDAVAVARRRSHAQTTSLHAISALLALPSSALRDACGRARSGAGAGTSAARFSAAYSPRLQFRALELSVGVSLDRLPSSKSTSAGEEEPPVSNSLMAAIKRSQANQRRHPESFHMFQQSQQGTASTSFLKVELKHFVLSILDDPIVSRVFAEAGFRSCDIKLALLQPPLPPVQHRFNWSPPVFLCNLDPAQPDENIRRIMEVLARKNKRNPLLMGVYAKSALKGFVEMVRNGRGGSALGSELRVVRLEREIGEFVKKGGSGEEKFGVRLKELEQQCEGSGSGVVVSFGEIEVFVGEDVDVDVVRFVVSGLTRLLEIRGEKVSLLGVAETSHAYSKFLGLFPNVENDWDLHLLTVTSATPSMEGLYSKSSLMGSFVPFGGFFSTPEIRSPVSCANGSFTRCDTCNKKCEQEVADLLKVDPSSSYSTSSHWLQKVVNMDAHRGSDVAKTNEENTSLNDKILGFQKKWSDICQRLHHTSSLPQFDISQTRSQAPTVEVLRFGLAFKESSNKDPSHSEFQYSSQISCMPKELHSIFPSKQLSVPLPSDTVCINTGTDHVPKVSETLQIHMNTPWVAPSLMANKSALDHRSSSFRTPVTTDLGLGTLYTSTAQDPDTPKLQDQRKHLQHLSDSVSTDCDGMNENTSHRIARFSCSGSNLEGKFDLADFKSLDRLLTEKVGWQDQAICAISQTLSLCKSGAGKRRGSNGRADIWLAFLGPDRLGKRKIASVLAETIFGNPESLISVDLGFQDSFYPLNSVFEYQKSRCYDVLRRKTILDYIAGELSKKPHSVVFLENVDKADVLVQNSLLQAVRTGKFSYSHGRVISINNTIFLVTSTVCKGNGSFVLEESKMFSEERILEAKRCQMQLLLGHASEDAGRIGSTNVKVVPGKGFSKSSSLNKRKQADISDSKEGATSKMQKQDSEASRSYLDLNMPVEDGEEGVNDDHESESITENTDAWLSDFFDQIDEKVVFKSFNFDELAEEVLKRIGMLFQRTFGSELQLEIDYEVITHILAAAWLSDKKNAVEDWVEHVLGKGFVEAQQKYLPAAQYVVKLVNCESIFVEEQAPDVCLPARINTD 1094
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g01925 1094 PANTHER DOUBLE CLP-N MOTIF P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 1 1092 - -
Gma14g01925 1094 MobiDBLite consensus disorder prediction 917 933 - -
Gma14g01925 1094 MobiDBLite consensus disorder prediction 906 943 - -
Gma14g01925 1094 Gene3D - 10 186 IPR036628 -
Gma14g01925 1094 Gene3D - 667 896 IPR027417 -
Gma14g01925 1094 PRINTS ATP-dependent Clp protease ATP-binding subunit signature 729 747 IPR001270 GO:0005524
Gma14g01925 1094 PRINTS ATP-dependent Clp protease ATP-binding subunit signature 808 826 IPR001270 GO:0005524
Gma14g01925 1094 PRINTS ATP-dependent Clp protease ATP-binding subunit signature 841 855 IPR001270 GO:0005524
Gma14g01925 1094 ProSiteProfiles Clp repeat (R) domain profile. 8 191 IPR004176 -
Gma14g01925 1094 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 678 1032 IPR027417 -
Gma14g01925 1094 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 1092 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g01925 Gma-Chr14 49960520 49965881 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g01925 - - gmx:100818456 2033.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g01925 14 49960520 49965881 Gma02g02148 02 47278430 47284140 GST
Gma18g00586 18 5747518 5753846 Gma14g01925 14 49960520 49965881 PCT
Gma11g01945 11 24996611 25002502 Gma14g01925 14 49960520 49965881 PCT
Gma14g01925 14 49960520 49965881 Gma18g00586 18 5747518 5753846 PCT
Gma14g01925 14 49960520 49965881 Gma11g01945 11 24996611 25002502 PCT