Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g01770 ATGGCTTCCTCTGTTGCTTTAGTTTTGGGTCTATGTCTAGCACTCAACATGGTTCTGCCGACACGTGCAGCTACCCACACAGTGGGAGACACCTCAGGTTGGGCACTCGGTGCTGATTATAGTACATGGGCCAGTGGCTTGAAATTGAAAGTCGGAGATAGTCTTGTTTTCAATTATGGGGCTGGTCACACAGTGGACGAAGTGAAAGAAAGTGATTACAAGAGCTGCACCACAGGCAATTCACTAAGCACAGACAGCAGTGGCACCACCACAATCACCCTCAAGACTGCCGGCACTCACTACTTCATATGTGGTTCTCCTGGCCATTGTGATGGTGGTATGAAGCTTGCTGTTAAAGTAAAGGCTAAAAAAGCATCTGCTCCTGCTACAGCACCTTCACCAGCTGCAAAGGACTCACCTGACACCAAAGACACACCCacttccacctccactaaccctaaaacttcaacctccaccaccccttcaactgaaacctccaccacAACCACATCTTCTTATACATCATCTGCAACTGCTGCTGGCTCCCCAATTGTTGCTATGTTTTTTGCTTCTTTGATCCCATACTTTGTGTTGCGTTTGATGTGA 606 0.4241 MASSVALVLGLCLALNMVLPTRAATHTVGDTSGWALGADYSTWASGLKLKVGDSLVFNYGAGHTVDEVKESDYKSCTTGNSLSTDSSGTTTITLKTAGTHYFICGSPGHCDGGMKLAVKVKAKKASAPATAPSPAAKDSPDTKDTPTSTSTNPKTSTSTTPSTETSTTTTSSYTSSATAAGSPIVAMFFASLIPYFVLRLM 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g01770 201 Pfam Plastocyanin-like domain 36 114 IPR003245 GO:0009055
Gma14g01770 201 CDD Phytocyanin 24 114 - -
Gma14g01770 201 ProSitePatterns Type-1 copper (blue) proteins signature. 98 114 IPR028871 -
Gma14g01770 201 PANTHER BLUE COPPER PROTEIN-LIKE 3 179 - -
Gma14g01770 201 SUPERFAMILY Cupredoxins 23 120 IPR008972 -
Gma14g01770 201 ProSiteProfiles Phytocyanin domain profile. 24 122 IPR003245 GO:0009055
Gma14g01770 201 MobiDBLite consensus disorder prediction 140 176 - -
Gma14g01770 201 MobiDBLite consensus disorder prediction 127 176 - -
Gma14g01770 201 PANTHER BLUE COPPER PROTEIN 3 179 IPR039391 GO:0009055
Gma14g01770 201 Gene3D - 22 127 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g01770 Gma-Chr14 47809660 47811290 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g01770 11 129 Miscellaneous Gene Families AT1G22480 56.303 5.91e-36 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g01770 - - gmx:100306407 257.684
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g01770 14 47809660 47811290 Gma14g01770 14 47809660 47811290 ECH
Gma14g01770 14 47809660 47811290 Gma02g01990 02 45305771 45307188 GST
Gma14g01770 14 47809660 47811290 Gma04g00907 04 9114131 9131020 PCT
Gma14g01770 14 47809660 47811290 Gma06g00892 06 8235958 8236962 PCT
Gma04g00907 04 9114131 9131020 Gma14g01770 14 47809660 47811290 PCT
Gma06g00892 06 8235958 8236962 Gma14g01770 14 47809660 47811290 PCT