Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00892 ATGGCATTCTCTAGTGCTTTGATTCTGTGGTCGTTGCTAGCAATCAACATGGCCCTGCCAACCCTCGCAACCGTCTACACCGTGGGAGATACTTCAGGTTGGGCAATTGGTACTGATTATAGCACTTGGACTGGCGACAAGATCTTTTCAGTGGGTGATAGTCTCGCGTTCAACTATGGAGCTGGGCACACAGTGGATGAAGTTAAAGAGAGCGATTACAAGTCGTGCACCGCAGGGAATTCTATTAGCACAGACAGTAGTGGTGCGACCACAATTGCCCTTAAAAGTGCAGGCACTCATTACTTCATATGTTCTGTTCCTGGACATTGTTCTGGCGGTATGAAACTTGCCGTCACTGTCAAATCAGGAAAAGCCTCTGATGCCACACCCACTACTTCCACAACTACCGCCACTAAATCAAACTCGTCTTCAGCGAGTAGTGTCTCACCAATTGTTGCTATGTTCATTGTTTCCTCGATCTCTTACTATGTTTTGCGTATGCTATAA 507 0.4655 MAFSSALILWSLLAINMALPTLATVYTVGDTSGWAIGTDYSTWTGDKIFSVGDSLAFNYGAGHTVDEVKESDYKSCTAGNSISTDSSGATTIALKSAGTHYFICSVPGHCSGGMKLAVTVKSGKASDATPTTSTTTATKSNSSSASSVSPIVAMFIVSSISYYVLRML 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00892 168 MobiDBLite consensus disorder prediction 125 144 - -
Gma06g00892 168 PANTHER BLUE COPPER PROTEIN 11 135 IPR039391 GO:0009055
Gma06g00892 168 Gene3D - 22 127 IPR008972 -
Gma06g00892 168 SUPERFAMILY Cupredoxins 23 120 IPR008972 -
Gma06g00892 168 CDD Phytocyanin 24 120 - -
Gma06g00892 168 ProSitePatterns Type-1 copper (blue) proteins signature. 98 114 IPR028871 -
Gma06g00892 168 PANTHER BLUE COPPER PROTEIN-LIKE 11 135 - -
Gma06g00892 168 Pfam Plastocyanin-like domain 34 114 IPR003245 GO:0009055
Gma06g00892 168 ProSiteProfiles Phytocyanin domain profile. 24 122 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00892 Gma-Chr6 8235958 8236962 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00892 31 122 Miscellaneous Gene Families AT1G22480 68.478 1.21e-38 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00892 - - gmx:100306522 292.737
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00892 06 8235958 8236962 Gma06g00892 06 8235958 8236962 ECH
Gma04g00907 04 9114131 9131020 Gma06g00892 06 8235958 8236962 GST
Gma14g01770 14 47809660 47811290 Gma06g00892 06 8235958 8236962 PCT
Gma02g01990 02 45305771 45307188 Gma06g00892 06 8235958 8236962 PCT
Gma06g00892 06 8235958 8236962 Gma14g01770 14 47809660 47811290 PCT
Gma06g00892 06 8235958 8236962 Gma02g01990 02 45305771 45307188 PCT