Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01990 ATGGCAATTTCTGTTGCTTTAATTTTGGGTCTATGTTTAGCAATGAACATGGCCCTGCCGACAGGTGCAGCTACCCACACGGTGGGAGACACCTCAGGTTGGGCACTCGGTGTTGATTACAGCACATGGGCTAGTGGCTTGAAATTTAAAGTTGGTGATAGTCTTGTTTTCAATTATGGGACTGGTCACACGGTGGACGAAGTAAAAGAAAGCGATTACAAGAGTTGCACAATGGGCAATTCACTGAGCACAGACAGCAGCGGCGCCACCACAATCACCCTCAAGACCGCCGGCACTCACTACTTCATGTGTGCTGCTCCTGGCCATTGTGACGGTGGCATGAAGCTTGCTGTTAAGGTAAAGGCTAAAAATGCCTCTGCTTCTGCTGCAGCACCTTCACCTGCAAAGGAATCACCTTCAGAATCTGATGATGCCAAAGACACACCCACTACTCCTACCTCCACCACCAATCCTAAAACTTCAACATCCACCACCCCTTCAACTGAAACCTCCACTACTACTACATCTTCTTATACGTCATCAGCAATTGGCGGCTCACCGATTGTTGCTATGTTTGTTGTTTCTTGGATCTCATACTTGTTGCTTATGATGTGA 615 0.4748 MAISVALILGLCLAMNMALPTGAATHTVGDTSGWALGVDYSTWASGLKFKVGDSLVFNYGTGHTVDEVKESDYKSCTMGNSLSTDSSGATTITLKTAGTHYFMCAAPGHCDGGMKLAVKVKAKNASASAAAPSPAKESPSESDDAKDTPTTPTSTTNPKTSTSTTPSTETSTTTTSSYTSSAIGGSPIVAMFVVSWISYLLLMM 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01990 204 Pfam Plastocyanin-like domain 36 114 IPR003245 GO:0009055
Gma02g01990 204 ProSiteProfiles Phytocyanin domain profile. 24 122 IPR003245 GO:0009055
Gma02g01990 204 MobiDBLite consensus disorder prediction 145 180 - -
Gma02g01990 204 PANTHER BLUE COPPER PROTEIN 9 171 IPR039391 GO:0009055
Gma02g01990 204 Gene3D - 22 127 IPR008972 -
Gma02g01990 204 CDD Phytocyanin 24 120 - -
Gma02g01990 204 ProSitePatterns Type-1 copper (blue) proteins signature. 98 114 IPR028871 -
Gma02g01990 204 PANTHER BLUE COPPER PROTEIN-LIKE 9 171 - -
Gma02g01990 204 SUPERFAMILY Cupredoxins 23 120 IPR008972 -
Gma02g01990 204 MobiDBLite consensus disorder prediction 127 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01990 Gma-Chr2 45305771 45307188 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01990 8 129 Miscellaneous Gene Families AT1G22480 51.639 5.06e-35 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01990 - - gmx:100305666 320.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g01990 02 45305771 45307188 Gma02g01990 02 45305771 45307188 ECH
Gma14g01770 14 47809660 47811290 Gma02g01990 02 45305771 45307188 GST
Gma02g01990 02 45305771 45307188 Gma04g00907 04 9114131 9131020 PCT
Gma02g01990 02 45305771 45307188 Gma06g00892 06 8235958 8236962 PCT
Gma04g00907 04 9114131 9131020 Gma02g01990 02 45305771 45307188 PCT
Gma06g00892 06 8235958 8236962 Gma02g01990 02 45305771 45307188 PCT