Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00907 ATGGCATTCTCTAGTGCTTTGGTTTTGGGCTCATTGCTAGCAATCAACATGGGCCTGCCAACCCTCGCAACCGACTACACCGTGGGAGATACTTCAGGTTGGGCAATTGGTGCTGATTATAGCACATGGACTGGTGACAAGACCTTTGTAATAGGTGATAGTCTTGTGTTCAAGTATGGAGGAGGAGGAGGGCACACAGTGGATGAGGTTAAAGAGAGCGAGTACAAGTCGTGCACAGCAGGGAATTCGATTAGCACAGACAGTAGTGGTGAGACCACAATTACTCTTAAAACCGCAGGCACTCATTACTTCATATGTTCTGTTCCTGGACATTGTTCTGGCGGCATGAAACTTGTCGTCACTGTCAAATCAGGAAAAGCCACTGATTCTTCTTCAACTTCAACTGGGAAGGCTTCACCTTCTGATGTCACACCCAACACCACTAAATCAAACTCGTCTTCAGCGAGTGGTGTCTCACCAATTGTTGCTATGTTTATTGTTTCGTGGATCTCTTACAATGTTTTGTATGGCGACCGCAGCGGCCAAGGCGACGGCGGTGACAGATTCGGAGGCGGAGACTCTGCAGAGGTGGGCGTGGCTGCTGGGGCTGACGGCGGGGGAGTCGGCGGTAATCAAAATAGTCATTGGGAGAGTGTCTCTATTGGTTATCATGTTCGTGCTAGTCATCTGCCTACAGGTCATCTGCATGGTCTTGCTGGTACTCGTGTTGCTATTGGTCTTGTTGTTGCTGGTGAGGTTGTTGTTGTTGTTGATGAATAA 780 0.4859 MAFSSALVLGSLLAINMGLPTLATDYTVGDTSGWAIGADYSTWTGDKTFVIGDSLVFKYGGGGGHTVDEVKESEYKSCTAGNSISTDSSGETTITLKTAGTHYFICSVPGHCSGGMKLVVTVKSGKATDSSSTSTGKASPSDVTPNTTKSNSSSASGVSPIVAMFIVSWISYNVLYGDRSGQGDGGDRFGGGDSAEVGVAAGADGGGVGGNQNSHWESVSIGYHVRASHLPTGHLHGLAGTRVAIGLVVAGEVVVVVDE 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00907 259 Pfam Plastocyanin-like domain 34 116 IPR003245 GO:0009055
Gma04g00907 259 PANTHER BLUE COPPER PROTEIN 4 144 IPR039391 GO:0009055
Gma04g00907 259 ProSiteProfiles Phytocyanin domain profile. 24 124 IPR003245 GO:0009055
Gma04g00907 259 SUPERFAMILY Cupredoxins 23 122 IPR008972 -
Gma04g00907 259 MobiDBLite consensus disorder prediction 127 156 - -
Gma04g00907 259 ProSitePatterns Type-1 copper (blue) proteins signature. 100 116 IPR028871 -
Gma04g00907 259 PANTHER BLUE COPPER PROTEIN-LIKE 4 144 - -
Gma04g00907 259 CDD Phytocyanin 24 122 - -
Gma04g00907 259 Gene3D - 22 129 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00907 Gma-Chr4 9114131 9131020 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00907 31 169 Miscellaneous Gene Families AT1G22480 46.853 5.89e-33 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00907 - - gmx:100818589 351.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00907 04 9114131 9131020 Gma04g00907 04 9114131 9131020 ECH
Gma04g00907 04 9114131 9131020 Gma06g00892 06 8235958 8236962 GST
Gma14g01770 14 47809660 47811290 Gma04g00907 04 9114131 9131020 PCT
Gma02g01990 02 45305771 45307188 Gma04g00907 04 9114131 9131020 PCT
Gma04g00907 04 9114131 9131020 Gma14g01770 14 47809660 47811290 PCT
Gma04g00907 04 9114131 9131020 Gma02g01990 02 45305771 45307188 PCT