Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g01142 ATGGTTACTACTCTTTCTGAAGCCTATAGGGACCACCCTCTCCACCTTCATCATATTATCCCCTTAGACTTTTCTTCACTTAGGACCATACCTGATTCCCATGCATGGCCTCAATCTGAAGATGGTGATGATGATAATCATGGAGCTGGATCATGCATACCCATCATTGACCTCATGGATCCTAGTGCCATGGAACTCATAGGCCTTGCTTGTGAGAATTGGGGTGCCTTCCAATTGACGAACCATGGCATACCCTTGAGTGTTGCTGAAGGGGTTGAAGAAGAGGCAAAGAGGCTCTTCGCACTCCCTGCCGACCAGAAACTGAAGGCATTGAGATCGGCCGCCGGTGCCACCGGCTACGGCCGAGCTCGGATATCACCGTTCTTCCCCAAGCACATGTGGCATGAAGGGTTCACCATCATGGGGTCTCCATGTGATGATGCCAAAAAGATCTGGCATAATGACTGTGCACGGTTTTGCCACATAATGAACAATTACCAGAAACAAATGAAGGCTCTAGCAGAGAAGCTAACACACATGATATTCAACTTATTGGGGAATATTTCTGAGGAACAAAAGCGGTGGATTGGTTCAACCAACCTCTGTGAAGCTGTTCAGTTAAACTTCTACCCTTGTTGCCCCGAGCCTAACCGAGCCATGGGCCTTGCCCCTCACACAGACACTTCCCTCCTCACAATCCTCCACCAAAGCCAAACCAATGGCCTCCAGATCTTCCAGGAAGGAGCAGGGTGGGTCCCTGTGCACCCTCACCCTGGCACCCTTTTTGTTCACACTGGTGACATACTTCACATCTTGTCCAACTCATGGTTTAGATGTGCACTGCATCGTGTCATGGTGAATAGTATGAGGCAAAGATACTCAGCGGCTTATTTCTATGCCCCCCCTATGGATCATGTAGTTTCTCCTTTGGTTCTTGATTCCTTGCCTCGGTTTCGTTCCTTGACTGTGAAGGAGTATATTGGCATTAAGGCCAAGAACCTTGGGGGAGCATTGTCGTTGATTAGTATGCTTAATAATAACTAA 1044 0.4818 MVTTLSEAYRDHPLHLHHIIPLDFSSLRTIPDSHAWPQSEDGDDDNHGAGSCIPIIDLMDPSAMELIGLACENWGAFQLTNHGIPLSVAEGVEEEAKRLFALPADQKLKALRSAAGATGYGRARISPFFPKHMWHEGFTIMGSPCDDAKKIWHNDCARFCHIMNNYQKQMKALAEKLTHMIFNLLGNISEEQKRWIGSTNLCEAVQLNFYPCCPEPNRAMGLAPHTDTSLLTILHQSQTNGLQIFQEGAGWVPVHPHPGTLFVHTGDILHILSNSWFRCALHRVMVNSMRQRYSAAYFYAPPMDHVVSPLVLDSLPRFRSLTVKEYIGIKAKNLGGALSLISMLNNN 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g01142 347 Gene3D - 17 333 IPR027443 -
Gma14g01142 347 PRINTS Isopenicillin N synthase signature 67 84 - -
Gma14g01142 347 PRINTS Isopenicillin N synthase signature 225 246 - -
Gma14g01142 347 PRINTS Isopenicillin N synthase signature 261 287 - -
Gma14g01142 347 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 198 301 IPR005123 -
Gma14g01142 347 Pfam non-haem dioxygenase in morphine synthesis N-terminal 53 146 IPR026992 -
Gma14g01142 347 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 12 337 - -
Gma14g01142 347 Pfam 2OG-Fe(II) oxygenase superfamily 204 301 IPR044861 -
Gma14g01142 347 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 12 337 - -
Gma14g01142 347 SUPERFAMILY Clavaminate synthase-like 17 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g01142 Gma-Chr14 17729812 17732168 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g01142 25 337 Glycosyltransferase AT5G59530 29.204 7.28e-34 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g01142 K04124 - gmx:100780857 716.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01946 17 34573493 34575850 Gma14g01142 14 17729812 17732168 GST
Gma14g01142 14 17729812 17732168 Gma04g00652 04 6015614 6017611 PCT
Gma14g01142 14 17729812 17732168 Gma06g00645 06 5838940 5840744 PCT