Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00652 ATGAACACTCTCTCTGAAGCCTACAAAGCACACCCTCTCCACCTCAGTCACATTATTCCCTTAGACTTTTCTTCAGCCCTTAGCTTACCTGATTCTCACGCATGGCCTCACTGTCAACCCAATGATGATGcatcatcatcatcatcatcatcatcCATACCCATCATAGACCTCATGGATCCCAATGCTATGGACCTCATAGGCCATGCATGTGAGAAGTGGGGTGCTTTCCAATTGAAGAACCATGGCATACCTTTTGGTGTCATTGAAGATGTTGAAGAAGAGGCTAAAAGACTTTTTGCTCTTCCCACTGAACAGAAGTTGAAGGCTCTTCGATCTCCCGGTGGTGCCACTGGGTATGGCAGAGCAAGGATTTCACCGTTCTTCCCAAAGTTTATGTGGCACGAAGGATTCACCATCATTGGCTCTCCCTCTCACGATGCCAAAAAGATATGGCCTAATGATTATGCACGCTTTTGTGATTTGATGGAGAATTATGAGAAGCAAATGAAGGTTCTAGCGGATAGACTAACAGAGATGATATTCAACTTAATGGACATAAGTGAGGAAAAAAGAAAGTGGGTTGGTGCAAGCAACATAAGTGAAGCTGTTCAGTTAAATTTCTACCCAAGTTGTCCCGAGCCAAACCGAGCCATGGGCTTAGCCCCTCACACCGACACTTCTCTCTTCACAATTCTTCACCAAAGTCAAATCACTGGTCTTCAAATCTTCAAGGAAGGAAAAGGGTGGGTTCCTGTGCACCCTCACCCTAATACCCTGGTCGTGCACACAGGCGATCTCTTGCACATCATTTCCAACGCAAGGTTTCGCTGTGCACTTCACCGCGTAACGGTGAATAGGACATGGGAACGTTACTCTGTGGCTTATTTCTATTCTCCACCGATGGATTATGTAGTTTCTCCTTTGGTTCACTCTGTTGCTCGTTTTCGTGATGTGACTGTGAAGGAGTATATTGGGATTAAGGCTAAGAATTTTGGAGAAGCATTGTCCTTTATTAGTACTTGA 1026 0.4396 MNTLSEAYKAHPLHLSHIIPLDFSSALSLPDSHAWPHCQPNDDASSSSSSSSIPIIDLMDPNAMDLIGHACEKWGAFQLKNHGIPFGVIEDVEEEAKRLFALPTEQKLKALRSPGGATGYGRARISPFFPKFMWHEGFTIIGSPSHDAKKIWPNDYARFCDLMENYEKQMKVLADRLTEMIFNLMDISEEKRKWVGASNISEAVQLNFYPSCPEPNRAMGLAPHTDTSLFTILHQSQITGLQIFKEGKGWVPVHPHPNTLVVHTGDLLHIISNARFRCALHRVTVNRTWERYSVAYFYSPPMDYVVSPLVHSVARFRDVTVKEYIGIKAKNFGEALSFIST 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00652 341 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 11 335 - -
Gma04g00652 341 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 11 335 - -
Gma04g00652 341 SUPERFAMILY Clavaminate synthase-like 18 333 - -
Gma04g00652 341 Pfam non-haem dioxygenase in morphine synthesis N-terminal 53 153 IPR026992 -
Gma04g00652 341 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 200 300 IPR005123 -
Gma04g00652 341 Pfam 2OG-Fe(II) oxygenase superfamily 202 300 IPR044861 -
Gma04g00652 341 Gene3D - 17 326 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00652 Gma-Chr4 6015614 6017611 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00652 43 324 Glycosyltransferase AT5G59530 30.263 9.24e-35 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00652 K04124 - gmx:100818754 699.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00652 04 6015614 6017611 Gma06g00645 06 5838940 5840744 GST
Gma17g01946 17 34573493 34575850 Gma04g00652 04 6015614 6017611 PCT
Gma14g01142 14 17729812 17732168 Gma04g00652 04 6015614 6017611 PCT