Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00645 ATGAACACTACTCTCTCTGAAGCCTACAAAGCACACCCTCTCCACCTCCGTGACATTATTCCCTTAGACTTTTCTTCAGCCCATAGCTTACCTGATTCTCACGCATGGTCTCACTCTCAACCCAACGATGATGATTATGTCTCATTCAATGATGATGCATCATCATCATCATTCATACCCATCATAGACCTCATGGATCCAAATGCCATGGAACAAATAGGCCATGCATGTGAGAAATGGGGTGCTTTCCAATTGAAGAACCATGGCATACCCTTTTGTGTTATTGAAGATGTAGAAGAAGAGGCTAAAAGGCTCTTTGCTCTTCCCACTGAACAGAAGTTGAAGGCTCTTCGATCTCCTGGTGGTGCGACGGGGTATGGCAGAGCAAGGATTTCACCGTTCTTCCCAAAGTTCATGTGGCATGAAGGGTTTACCATCATTGGTTCTCCCTCTCATGATGCCAAAAAGATATGGCCTAACGATCATGCAGGGTTTTGTGATTTGATGGAGAATTATGAGAAGCAAATGAAGGTTCTAGCGGAGAGACTAACACAGATGATGTTCAGCTTAATGGACATAAGTGAGGAGAAAACAAAGTGGGTTGGTGCAAGCAACATAAGTGGAGCTGTTCAGTTAAATTTTTACCCAAGTTGTCCCGAGCCAAACCGAGCCATGGGCTTAGCCCCTCACACAGACACTTCTCTCTTCACAATTCTTCACCAAAGCCGAATCACTGGTCTTCAAATCTTCAAGGAAGGAAAAGAGTGGGTTCCTGTGCACCCTCACCCTAACACCCTGGTCGTGCACACTGGAGATCTCTTGCACATCATTTCCAACGCCAGGTTCCGTAGTGCACTTCACCGTGTAACGGTGAATAGTACACGGGAACGTTACTCTGTGGCTTATTTCTATTCTCCACCGTTAGATTATGTGGTTTCTCCTTTAGTTGACTCTGTCGCTCGTTTTCGTGATGTGACTGTGAAGGAGTATATTGGGATCAAAGCCAAGAATTTTGGAGAAGCATTGTCTTTGATTAGTACTTGA 1044 0.4483 MNTTLSEAYKAHPLHLRDIIPLDFSSAHSLPDSHAWSHSQPNDDDYVSFNDDASSSSFIPIIDLMDPNAMEQIGHACEKWGAFQLKNHGIPFCVIEDVEEEAKRLFALPTEQKLKALRSPGGATGYGRARISPFFPKFMWHEGFTIIGSPSHDAKKIWPNDHAGFCDLMENYEKQMKVLAERLTQMMFSLMDISEEKTKWVGASNISGAVQLNFYPSCPEPNRAMGLAPHTDTSLFTILHQSRITGLQIFKEGKEWVPVHPHPNTLVVHTGDLLHIISNARFRSALHRVTVNSTRERYSVAYFYSPPLDYVVSPLVDSVARFRDVTVKEYIGIKAKNFGEALSLIST 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00645 347 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 13 341 - -
Gma06g00645 347 Pfam non-haem dioxygenase in morphine synthesis N-terminal 59 159 IPR026992 -
Gma06g00645 347 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 13 341 - -
Gma06g00645 347 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 205 306 IPR005123 -
Gma06g00645 347 SUPERFAMILY Clavaminate synthase-like 18 339 - -
Gma06g00645 347 Pfam 2OG-Fe(II) oxygenase superfamily 210 306 IPR044861 -
Gma06g00645 347 Gene3D - 18 338 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00645 Gma-Chr6 5838940 5840744 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00645 59 330 Glycosyltransferase AT5G59530 30.272 2.64e-34 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00645 K04124 - gmx:100794325 716.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00652 04 6015614 6017611 Gma06g00645 06 5838940 5840744 GST
Gma17g01946 17 34573493 34575850 Gma06g00645 06 5838940 5840744 PCT
Gma14g01142 14 17729812 17732168 Gma06g00645 06 5838940 5840744 PCT