Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00948 ATGATTTTATCTTTGGCAATGTCTCCTGATGGCCTCTATTTGGCATCTGGTGATGAAGACGGCACAATCATGATTTGGGACCTCTCTAGTGGCTGTTGCATCACGCCTTTAGTTGGTCACACCTCATGTGTCTGGTCACTCACTTTCAGTTGTGAAGGTTCTCTTCTAGCATCTGGATCCGCGGATTGCACTGTCAAGTTTGGGGATGTAACTACAGAAGTGGGAATACTAACAGACTCAGATCATCGAAAAGCCTGCCTACCAAATCTGCTTCAGTTTACTCTCTCCAGTTTTCTAGAAGGAATCTTCTTTTTGCAGCTGGAGCTATTGCAAAAAGTGGCTGATAGTGTGTCTTCAAATTTCAAAGTGACAATTCTGACTTGA 384 0.4349 MILSLAMSPDGLYLASGDEDGTIMIWDLSSGCCITPLVGHTSCVWSLTFSCEGSLLASGSADCTVKFGDVTTEVGILTDSDHRKACLPNLLQFTLSSFLEGIFFLQLELLQKVADSVSSNFKVTILT 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00948 127 ProSiteProfiles Trp-Asp (WD) repeats profile. 37 78 IPR001680 GO:0005515
Gma14g00948 127 PANTHER CANNONBALL-RELATED 1 91 - -
Gma14g00948 127 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID 1 91 IPR037783 -
Gma14g00948 127 SMART WD40_4 1 27 IPR001680 GO:0005515
Gma14g00948 127 SMART WD40_4 30 69 IPR001680 GO:0005515
Gma14g00948 127 Pfam WD domain, G-beta repeat 2 27 IPR001680 GO:0005515
Gma14g00948 127 Pfam WD domain, G-beta repeat 31 67 IPR001680 GO:0005515
Gma14g00948 127 ProSitePatterns Trp-Asp (WD) repeats signature. 14 28 IPR019775 -
Gma14g00948 127 ProSiteProfiles Trp-Asp (WD) repeats profile. 1 36 IPR001680 GO:0005515
Gma14g00948 127 Gene3D - 1 89 IPR015943 GO:0005515
Gma14g00948 127 SUPERFAMILY WD40 repeat-like 2 85 IPR036322 GO:0005515
Gma14g00948 127 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00948 Gma-Chr14 10870310 10871322 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g00948 14 94 Miscellaneous Gene Families AT5G08390 35.802 2.46e-08 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00948 K03130 - gmx:102662777 253.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02118 17 38661313 38681791 Gma14g00948 14 10870310 10871322 GST
Gma14g00948 14 10870310 10871322 Gma04g00571 04 5118318 5127521 PCT
Gma14g00948 14 10870310 10871322 Gma06g00557 06 4935063 4942315 PCT
Gma04g00571 04 5118318 5127521 Gma14g00948 14 10870310 10871322 PCT
Gma06g00557 06 4935063 4942315 Gma14g00948 14 10870310 10871322 PCT