Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00472 ATGGAAGCTCTCAAGACCCTCTTCTTAGCCATTTTTGTTGTCTTGGCTTCCGCATTGTATTCAGCCAATGCCAAAATCCAGGAGCATGAATTTGTTattcaagcaacgccagtgaagaggctgtgcaacacccacagcaccatcacagtgaatggacaattccctggtccaacattggaagtcaacaatggtgacactttggtcgtcaaagtcactaacaaagctcgttacaatgtgactattcactgGCATGGAATTCGGCAAATGAGAACAGGATGGGCTGATGGACCAGAATTTGTGACTCAGTGCCCTATTCGTCCTGGAGAAAGTTACACCTATCGTTTTACCATTCAAGGACAAGAAGGAACACTTTGGTGGCATGCTCATAGCTCATGGCTAAGAGCCACTGTTTATGGTGCTTTAATCATTCACCCCAGGGAGGGAGAGGCGTATCCTTTCACTAAGCCAAAGCGCGAGACTCCAATTCTTCTTGGGGAGTGGTGGGACGCAAACCCGATCGATGTTGTGAGACAAGCTACACAAACAGGAGCAGCACCTAATACTTCTGATGCATACACCATCAATGGTCAACCTGGCGATCTTTACAAGTGTTCTAGCCAAGGCACCACCATTGTTCCAATAGATTCTGGCGAGACAAACCTCCTAAGAGTGATCAATGCAGCACTGAACCAACCCTTGTTCTTCACAGTGGCCAACCACAAGCTCACAGTGGTTGGTGCCGATGCCTCCTACCTTAAACCCTTCACCACCAACGTCATCATGCTGGGACCAGGCCAAACCACCGATGTCCTCATCCAAGGTGACCAACCTCCCACACGCTACTACATGGCCGCACGTGCCTACCAATCCGCCCAAAACGCACCGTTTGACAACACCACCACCACCGCCATTCTCGAATATAAATCCGCACCGTGCCCCACCAAGGGTTCTTCGATCAAACCCGTTATGCCGTCTCTCCCAGCCTACAACGACACCAACACAGTCACTGCTTTCAGCAAAAGCTTCAGAAGCCCCAGAAAAGTTGAAGTCCCCGCAGAAATTGATGACAATCTTTTCTTCACCATTGGCCTTGGACTCAACAATTGCCCGAAAAATTTCAATGCGAACCAATGCCAGGGACCGAATGGAACGCGTTTCACTGCCAGCATGAACAATGTCTCGTTTGTTCTCCCAAACAACGTTTCCATCTTGCAGGCTCATCACCTTGGTGTGCAAGGAGTGTTCACCACTGATTTTCCTACGCAACCTCCTGTCAAGTTTGATTACACTGGTAATGTGAGTCGTTCTCTGTGGCAACCTGTTCAAGGGACCAAAGTGACCAAGTTGAAGTTTGGATCGAGGGTGCAGATTGTGTTGCAGGATACTAGCATTGTGACCCCTGAGAACCACCCCATTCACCTTCATGGGTATGATTTCTACATCGTGGCTGAGGGGTTTGGGAATTTTGATCCGAACAAAGATACTTCCAAGTTCAACCTTGTTGATCCACCTATGAGGAACACTGTGGCTGTGCCAGTGAATGGATGGGCAGTTATCAGATTTGTTGCTGACAACCCAGGAGCTTGGATCATGCATTGTCACTTGGATGTTCACATCGGATGGGGTTTGGCCACTGTGCTTTTGGTGGATAATGGAGTAGGCCTGTTGCAATCCATAGAGCCCCCTCCTGAGGATCTGCCTCTATGTTAG 1710 0.445 MEALKTLFLAIFVVLASALYSANAKIQEHEFVIQATPVKRLCNTHSTITVNGQFPGPTLEVNNGDTLVVKVTNKARYNVTIHWHGIRQMRTGWADGPEFVTQCPIRPGESYTYRFTIQGQEGTLWWHAHSSWLRATVYGALIIHPREGEAYPFTKPKRETPILLGEWWDANPIDVVRQATQTGAAPNTSDAYTINGQPGDLYKCSSQGTTIVPIDSGETNLLRVINAALNQPLFFTVANHKLTVVGADASYLKPFTTNVIMLGPGQTTDVLIQGDQPPTRYYMAARAYQSAQNAPFDNTTTTAILEYKSAPCPTKGSSIKPVMPSLPAYNDTNTVTAFSKSFRSPRKVEVPAEIDDNLFFTIGLGLNNCPKNFNANQCQGPNGTRFTASMNNVSFVLPNNVSILQAHHLGVQGVFTTDFPTQPPVKFDYTGNVSRSLWQPVQGTKVTKLKFGSRVQIVLQDTSIVTPENHPIHLHGYDFYIVAEGFGNFDPNKDTSKFNLVDPPMRNTVAVPVNGWAVIRFVADNPGAWIMHCHLDVHIGWGLATVLLVDNGVGLLQSIEPPPEDLPLC 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00472 569 CDD CuRO_2_LCC_plant 161 307 IPR034285 -
Gma14g00472 569 ProSitePatterns Multicopper oxidases signature 2. 532 543 IPR002355 GO:0005507
Gma14g00472 569 PANTHER MULTI-COPPER OXIDASE 5 569 IPR045087 -
Gma14g00472 569 PANTHER LACCASE 5 569 - -
Gma14g00472 569 SUPERFAMILY Cupredoxins 351 569 IPR008972 -
Gma14g00472 569 SUPERFAMILY Cupredoxins 153 345 IPR008972 -
Gma14g00472 569 Gene3D - 367 569 IPR008972 -
Gma14g00472 569 ProSitePatterns Multicopper oxidases signature 1. 527 547 IPR033138 -
Gma14g00472 569 Pfam Multicopper oxidase 159 309 IPR001117 -
Gma14g00472 569 Gene3D - 157 347 IPR008972 -
Gma14g00472 569 Pfam Multicopper oxidase 419 551 IPR011706 GO:0005507|GO:0016491
Gma14g00472 569 CDD CuRO_1_LCC_plant 29 145 IPR034288 GO:0005507
Gma14g00472 569 Gene3D - 15 145 IPR008972 -
Gma14g00472 569 SUPERFAMILY Cupredoxins 23 172 IPR008972 -
Gma14g00472 569 TIGRFAM laccase: laccase 24 569 IPR017761 GO:0046274|GO:0048046|GO:0052716
Gma14g00472 569 CDD CuRO_3_LCC_plant 414 552 IPR034289 GO:0005507
Gma14g00472 569 Pfam Multicopper oxidase 33 147 IPR011707 GO:0005507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00472 Gma-Chr14 4453024 4457015 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00472 K05909 - gmx:100796956 1181.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02465 02 50701758 50711596 Gma14g00472 14 4453024 4457015 ECH
Gma14g00472 14 4453024 4457015 Gma14g00472 14 4453024 4457015 ECH
Gma18g00219 18 1753892 1758751 Gma14g00472 14 4453024 4457015 PCT
Gma11g02356 11 38961565 38966244 Gma14g00472 14 4453024 4457015 PCT
Gma14g00472 14 4453024 4457015 Gma18g00219 18 1753892 1758751 PCT
Gma14g00472 14 4453024 4457015 Gma11g02356 11 38961565 38966244 PCT