Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00219 ATGGAGCCTGCCAAAACCATTCACAACAATGTCAAATACTCCCCCATCTTCTTAGCCATCTTTGTTCTGATCTTAGCTTCAgcattgtcttcagcaaatgccaaaattcacgagcacgagtttgttgttgaagcaactccagtgaagaggctgtgcaaaacccacaacagcatcaccgtgaatggacaatacccgggcccaacgttggaaatcaacaatggagacactttggtcgtcaaagtcactaacaaagctcgttacaatgtgaccattcattggcacggtgttaggcaaatgagaacagggtgggcagatggaccagaatttgtgactcagtgcccgattcgtccaggaggaagttacacctaccgttttaccgttcaaggacaagaaggcacactttggtggcacgctcatagctcatggttaagggccaccgtttacggtgctttaatcattcgtcctagggaaggagaaccctacccTTTCCCCAAGCCTAAGCACGAGACACCCATTCTTCTTGGGGAATGGTGGGACGCAAACCCTATTGATGTTGTGAGGCAGGCCACACGAACTGGGGGAGCCCCAAACGTGTCTGATGCATACACTATCAATGGTCAACCTGGTGATCTTTACAAGTGCTCCAGCAAAGACACCACCATTGTCCCAATACATGCCGGCGAGACCAACCTTCTTCGTGTCATCAATGCTGCACTCAATCAACCTCTCTTCTTCACCGTCGCAAACCACAAACTCACAGTGGTTGGTGCCGACGCCTCCTACCTCAAACCCTTCACCACCAAAGTCCTCATGCTGGGCCCCGGGCAAACCACCGACGTCTTAATCACCGGCGACCAGCCACCTTCCCGCTACTACATGGCGGCGCGTGCGTACCAATCCGCCCAAAACGCTGCCTTCGACAACACCACCACAACCGCCATACTCGAATACAAATCACCGAATCACCACAATAAGCATTCTCACCATCATGCCAAAGGAGTAAAGAACAAAACCAAACCTATAATGCCTCCACTCCCTGCTTACAACGACACAAACGCAGTCACTGCCTTCAGCAAAAGCTTCAGAAGCCCTAGAAAAGTTGAAGTACCCACTGAAATTGACCAGAGCCTCTTCTTCACTGTGGGTTTAGGTATCAAGAAGTGCCCCAAAAACTTCGGACCAAAGAGGTGTCAGGGACCcattaatgggacgaggttcactgcgagcatgaacaacgtgtctttcgttctcccgaacaacgtgtccatcttgcaggctcaccacctcggaatccctggagtgttcaccactgattttccggggaagccgccggtgaagtttgattacaccggcaatgtgagccgttcgctgtggcaacctgttcccgggacaaaggcacacaagttgaagtttgggtcgagggtgcagattgtgttgcaggatactagcattgtcactcctgagaaccaccctatccatcttcatgggtacgatttctacattgttgcagagggtttcgggaacttcgacccaaagaaagatacggcgaaattcaaccttgttgatccacctttgagaaacacagtggctgtgcctgtaaatggatgggcagttattcgatttgtggctgataacccaggtgcatggcttttgcattgtcacttggacgttcacattggatggggtttggctacggtgttgttggtggagaatggagttgggaagttgcaatccatagagcctcctcctgtggatcttccTCTTTGTTAG 1770 0.2288 MEPAKTIHNNVKYSPIFLAIFVLILASALSSANAKIHEHEFVVEATPVKRLCKTHNSITVNGQYPGPTLEINNGDTLVVKVTNKARYNVTIHWHGVRQMRTGWADGPEFVTQCPIRPGGSYTYRFTVQGQEGTLWWHAHSSWLRATVYGALIIRPREGEPYPFPKPKHETPILLGEWWDANPIDVVRQATRTGGAPNVSDAYTINGQPGDLYKCSSKDTTIVPIHAGETNLLRVINAALNQPLFFTVANHKLTVVGADASYLKPFTTKVLMLGPGQTTDVLITGDQPPSRYYMAARAYQSAQNAAFDNTTTTAILEYKSPNHHNKHSHHHAKGVKNKTKPIMPPLPAYNDTNAVTAFSKSFRSPRKVEVPTEIDQSLFFTVGLGIKKCPKNFGPKRCQGPINGTRFTASMNNVSFVLPNNVSILQAHHLGIPGVFTTDFPGKPPVKFDYTGNVSRSLWQPVPGTKAHKLKFGSRVQIVLQDTSIVTPENHPIHLHGYDFYIVAEGFGNFDPKKDTAKFNLVDPPLRNTVAVPVNGWAVIRFVADNPGAWLLHCHLDVHIGWGLATVLLVENGVGKLQSIEPPPVDLPLC 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00219 589 PANTHER LACCASE 12 589 - -
Gma18g00219 589 Pfam Multicopper oxidase 169 318 IPR001117 -
Gma18g00219 589 SUPERFAMILY Cupredoxins 369 589 IPR008972 -
Gma18g00219 589 CDD CuRO_1_LCC_plant 39 155 IPR034288 GO:0005507
Gma18g00219 589 PANTHER MULTI-COPPER OXIDASE 12 589 IPR045087 -
Gma18g00219 589 Gene3D - 167 366 IPR008972 -
Gma18g00219 589 SUPERFAMILY Cupredoxins 163 364 IPR008972 -
Gma18g00219 589 ProSitePatterns Multicopper oxidases signature 2. 552 563 IPR002355 GO:0005507
Gma18g00219 589 CDD CuRO_2_LCC_plant 171 317 IPR034285 -
Gma18g00219 589 Gene3D - 396 589 IPR008972 -
Gma18g00219 589 SUPERFAMILY Cupredoxins 33 182 IPR008972 -
Gma18g00219 589 TIGRFAM laccase: laccase 34 589 IPR017761 GO:0046274|GO:0048046|GO:0052716
Gma18g00219 589 Pfam Multicopper oxidase 43 157 IPR011707 GO:0005507
Gma18g00219 589 ProSitePatterns Multicopper oxidases signature 1. 547 567 IPR033138 -
Gma18g00219 589 Gene3D - 38 166 IPR008972 -
Gma18g00219 589 CDD CuRO_3_LCC_plant 434 572 IPR034289 GO:0005507
Gma18g00219 589 Pfam Multicopper oxidase 439 571 IPR011706 GO:0005507|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00219 Gma-Chr18 1753892 1758751 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00219 K05909 - gmx:547704 1195.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00219 18 1753892 1758751 Gma11g02356 11 38961565 38966244 ECH
Gma18g00219 18 1753892 1758751 Gma18g00219 18 1753892 1758751 ECH
Gma18g00219 18 1753892 1758751 Gma11g02356 11 38961565 38966244 GST
Gma18g00219 18 1753892 1758751 Gma14g00472 14 4453024 4457015 PCT
Gma14g00472 14 4453024 4457015 Gma18g00219 18 1753892 1758751 PCT