Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02465 ATGGAAGCTCTCAAGACCATCTTCTTAGCCCTTTCTGTTGTCTTAGCTTCAGCATTGTATTCAGTCAATGCCAAAATCCAGGAGCATGAGTTTGTTattcaagcaacgccagtgaagaggctgtgcaacacccacaacactatcacggtgaatggccaattccctggcccaacattggaagtcaacaatggagacactttggtcgtcaaagtcactaacaaagctcgttacaacgtgaccattcactggcatggaattcgacaaatgagaacaggatgggctgatggaccagaatttgtgactcagtgccctattcgtcctggagaaagttacacctatcgttttaccattcaaggacaagaaggaacactttggtggcatgctcatagctcatggctaagagcaacagtttatggtgctttaatcattcaccccagggagggagaggcatatcctttcactAAGCCAAAGCGCGAGACACCAATTCTTCTTGGGGAGTGGTGGGACGCAAACCCGATCGATGTTGTGAGACAAGCCACACAAACAGGAGCAGCACCTAATATTTCTGATGCATACACCATCAATGGTCAACCTGGTGATCTTTACAAGTGTTCTAGCCAAGGCAGCACCATCGTTCCAATAGATTCTGGCGAGACAAACCTCCTAAGAGTGATCAATGCAGCACTGAACCAACCCTTGTTCTTCAAAGTGGCGAACCACAAGCTCACGGTGGTTGGTGCCGATGCTTCCTACCTTAAACCCTTCACCACCAACGTCATCATGCTGGGACCAGGCCAAACCACCGATGTCCTCATCCAAGGTGACCAACCTCCCACACGCTACTACATGGCCGCACGTGCCTACCAATCCGCGCAAAACGCACCGTTTGACAACACCACCACCACCGCCATTCTCGAATACAAATCCGCACCTTGCCCCGCCAAGGGTTCTTCGATCAAACCCGTTATGCCGTCTCTCCCTGCCTACAACGACACCAACACAGTCACTGCATTCAGTAAAAGCTTCAGAAGCCCCAGAAAAGTTGAAGTCCCCGCAGAAATCGATGAAAATCTTTTCTTCACCATTGGCCTTGGACTCAACAATTGCCCAAAAAATTTCAACGCAAACCAATGCCAGGGACCGaatggaacgcgcttcactgccagcatgaacaatgtctcgtttgttctccccaacaacgtttcgatcttgcaggctcatcaccttggagtgcaaggcgtgttcaccactgattttcctacgcagcctcctgttaagtttgattacactggtaattcaatggatgggcagttatcagatttgttgctgacaacccaggagcttggattatgcattgtcacttggatgttcacatcggatgggTATCGCCATAGATTGTGA 1401 0.2805 MEALKTIFLALSVVLASALYSVNAKIQEHEFVIQATPVKRLCNTHNTITVNGQFPGPTLEVNNGDTLVVKVTNKARYNVTIHWHGIRQMRTGWADGPEFVTQCPIRPGESYTYRFTIQGQEGTLWWHAHSSWLRATVYGALIIHPREGEAYPFTKPKRETPILLGEWWDANPIDVVRQATQTGAAPNISDAYTINGQPGDLYKCSSQGSTIVPIDSGETNLLRVINAALNQPLFFKVANHKLTVVGADASYLKPFTTNVIMLGPGQTTDVLIQGDQPPTRYYMAARAYQSAQNAPFDNTTTTAILEYKSAPCPAKGSSIKPVMPSLPAYNDTNTVTAFSKSFRSPRKVEVPAEIDENLFFTIGLGLNNCPKNFNANQCQGPNGTRFTASMNNVSFVLPNNVSILQAHHLGVQGVFTTDFPTQPPVKFDYTGNSMDGQLSDLLLTTQELGLCIVTWMFTSDGYRHRL 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02465 466 CDD CuRO_2_LCC_plant 161 307 IPR034285 -
Gma02g02465 466 PANTHER MULTI-COPPER OXIDASE 6 433 IPR045087 -
Gma02g02465 466 Gene3D - 157 347 IPR008972 -
Gma02g02465 466 SUPERFAMILY Cupredoxins 153 345 IPR008972 -
Gma02g02465 466 Pfam Multicopper oxidase 159 309 IPR001117 -
Gma02g02465 466 Pfam Multicopper oxidase 33 147 IPR011707 GO:0005507
Gma02g02465 466 Gene3D - 12 145 IPR008972 -
Gma02g02465 466 PANTHER LACCASE 6 433 - -
Gma02g02465 466 CDD CuRO_1_LCC_plant 29 145 IPR034288 GO:0005507
Gma02g02465 466 TIGRFAM laccase: laccase 24 438 IPR017761 GO:0046274|GO:0048046|GO:0052716
Gma02g02465 466 SUPERFAMILY Cupredoxins 351 438 IPR008972 -
Gma02g02465 466 SUPERFAMILY Cupredoxins 21 172 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02465 Gma-Chr2 50701758 50711596 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02465 K05909 - gmx:100797749 886.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02465 02 50701758 50711596 Gma14g00472 14 4453024 4457015 ECH
Gma02g02465 02 50701758 50711596 Gma02g02465 02 50701758 50711596 ECH