Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02892 ATGGAGAAAGAAACAGAGATGAAGCAATCCAAGTTCAAGAGGATTTGTGTCTTCTGTGGCAGTAGTCCAGGGAACAAAACTAGTTATAAGGACGCTGCTATTGAGCTTGGAAGAGAATTGGTGTCAAGAAATATTGATCTAGTATATGGAGGGGGCAGCATTGGTTTGATGGGGTTGATTTCTCAGGCTGTTTACGAGGGTGGTCGCCATGTAACTGGAGTTATTCCCAAGACACTTATGCCAAGAGAGCTCACTGGAGAAACAGTGGGGGAAGTGAAGGCAGTAGCAGACATGCATCAAAGGAAAGCAGAGATGGCCAAGCGCTCTGATGCCTTTATTGCCTTACCCGGTGGCTATGGGACACTTGAGGAACTCCTTGAGGTGATAACATGGGCTCAACTTGGCATCCATGATAAACCGGTGGGATTGCTGAATGTTGATGGATACTACAATACCTTTTTGTCTTTCATTGACAAAGCGGTGGAGGAAGGCTTCATAAGCCCCACTGCTCGTCATATAATTGTATCTGCCCCAACACCAAAAGAGCTTGTCAAAGAGATGGAGGAATATTTCCCACAACACGAAAGAGTTGTCTCCAAGCTAAGCTGGGAAAGTGAACAGCTACATTAG 630 0.4556 MEKETEMKQSKFKRICVFCGSSPGNKTSYKDAAIELGRELVSRNIDLVYGGGSIGLMGLISQAVYEGGRHVTGVIPKTLMPRELTGETVGEVKAVADMHQRKAEMAKRSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNTFLSFIDKAVEEGFISPTARHIIVSAPTPKELVKEMEEYFPQHERVVSKLSWESEQLH 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02892 209 Gene3D - 2 189 - -
Gma13g02892 209 SUPERFAMILY MCP/YpsA-like 11 190 - -
Gma13g02892 209 Pfam Possible lysine decarboxylase 57 187 IPR031100 -
Gma13g02892 209 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE 1 209 - -
Gma13g02892 209 PANTHER LOG FAMILY PROTEIN YJL055W 1 209 - -
Gma13g02892 209 TIGRFAM TIGR00730: TIGR00730 family protein 13 190 IPR005269 GO:0009691|GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02892 Gma-Chr13 43495786 43501086 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02892 K22522 - gmx:100811156 414.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02892 13 43495786 43501086 Gma13g02892 13 43495786 43501086 ECH
Gma13g02892 13 43495786 43501086 Gma12g01649 12 36653192 36659248 GST
Gma13g02892 13 43495786 43501086 Gma12g00680 12 5973645 5979702 PCT
Gma13g02892 13 43495786 43501086 Gma11g01630 11 17632084 17638221 PCT
Gma12g00680 12 5973645 5979702 Gma13g02892 13 43495786 43501086 PCT
Gma11g01630 11 17632084 17638221 Gma13g02892 13 43495786 43501086 PCT