Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01630 ATGGAAGGTGAAGAAACTGAGATGAAACAACAATCCAGGTTCAAGAGGATTTGTGTGTTCTGTGGAAGCAGCCCCGGAAACAAGAGTAGCTATAAGGATGCTGCTATTGAGCTTGGGAAAGAGTTGGTGTCAAGAAATATTGATCTGGTTTATGGAGGAGGCAGCATCGGTTTGATGGGGTTGGTTTCCCAGGCTGTTTATGAAGGAGGTCGCCATGTAATTGGAGTTATTCCCAAGACACTGATGCCAAGAGAGATTACTGGAGAGACAGTGGGGGAAGTGATGGCAGTAGCAGACATGCATCAAAGAAAAGCAGAGATGGCTAGGCACTCTGATGCCTTTATTGCCTTACCTGGTGGCTATGGGACACTTGAGGAGCTTCTAGAGGTGATAACTTGGGCTCAGCTTGGCATCCATGATAAACCGGTTGGGTTGCTGAATGTAGATGGATACTACAATTCCTTGTTGTCTTTCATTGACAAAGCTGTGGAAGAAGGCTTCATTAGCCCCAAAGCTCGCCACATAATTGTATCTGCCCCATCAACAAAAGAGCTTGTAAAAGAGATGGAGGAATATTTCCCACAACATGAAAGAGTTGCCTCTAAGCTAAGCTGGGAAACTGAGCAGATAGATTACTCCTCAAATTGTGACATGTCTAGGTGA 663 0.451 MEGEETEMKQQSRFKRICVFCGSSPGNKSSYKDAAIELGKELVSRNIDLVYGGGSIGLMGLVSQAVYEGGRHVIGVIPKTLMPREITGETVGEVMAVADMHQRKAEMARHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEGFISPKARHIIVSAPSTKELVKEMEEYFPQHERVASKLSWETEQIDYSSNCDMSR 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01630 220 Pfam Possible lysine decarboxylase 59 189 IPR031100 -
Gma11g01630 220 PANTHER LOG FAMILY PROTEIN YJL055W 5 220 - -
Gma11g01630 220 Gene3D - 3 191 - -
Gma11g01630 220 SUPERFAMILY MCP/YpsA-like 13 192 - -
Gma11g01630 220 TIGRFAM TIGR00730: TIGR00730 family protein 15 192 IPR005269 GO:0009691|GO:0016787
Gma11g01630 220 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE LOG1 5 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01630 Gma-Chr11 17632084 17638221 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01630 K22522 - gmx:100819644 441.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01630 11 17632084 17638221 Gma11g01630 11 17632084 17638221 ECH
Gma11g01630 11 17632084 17638221 Gma12g00680 12 5973645 5979702 ECH
Gma12g00680 12 5973645 5979702 Gma11g01630 11 17632084 17638221 GST
Gma13g02892 13 43495786 43501086 Gma11g01630 11 17632084 17638221 PCT
Gma12g01649 12 36653192 36659248 Gma11g01630 11 17632084 17638221 PCT
Gma11g01630 11 17632084 17638221 Gma13g02892 13 43495786 43501086 PCT
Gma11g01630 11 17632084 17638221 Gma12g01649 12 36653192 36659248 PCT