Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01649 ATGACAAAGTTAAATAATACCCAATATTTGGGTCAACTTACGCTGTGTCTAGCATACACAAGAAGTAACATCTCAAGAGGGGACCATGGTAAAGTAGAACACACACACATCATTGGATCAAGTCTCCCTGATCAGTCTCTACGTACAAGTTGTGTGTCAAGAAATATTGATCTAGTGTATGGAGGGGGCAGCATTGGTTTGATGGGGTTGATTTCTCAGGCTGTTTACGAGGGTGGTCGCCATGTAACTGGAGTTATTCCCAAGACACTTATGCCAAGAGAGCTCACTGGAGAAACAGTGGGGGAAGTGAAGGCAGTAGCAAACATGCACCAAAGGAAAGCTGAGATGGCTAAGCGCTCTGATGCCTTCATTGCCTTACCCGGTGGCTATGGGACACTTGAAGAACTCCTTGAGGTGATAACATGGGCTCAACTTGGCATCCATGATAAACCGGTGGGATTGCTGAATGTTGATGGATACTACAATACCTTTTTGTCTTTTATTGACAAAGCGGTGGAGGAAGGCTTCATCAGCCCCACTGCTCGCCATATAATTGTATCTGCCCCAACACCAAAAGAGCTTGTCAAAGAGATGGAGGAATATTTCCCACAACATGAAAGAGTTGTCTCTAAGCTAAGCTGGGAAAGTGAACAGCTACATTAG 663 0.448 MTKLNNTQYLGQLTLCLAYTRSNISRGDHGKVEHTHIIGSSLPDQSLRTSCVSRNIDLVYGGGSIGLMGLISQAVYEGGRHVTGVIPKTLMPRELTGETVGEVKAVANMHQRKAEMAKRSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNTFLSFIDKAVEEGFISPTARHIIVSAPTPKELVKEMEEYFPQHERVVSKLSWESEQLH 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01649 220 TIGRFAM TIGR00730: TIGR00730 family protein 51 201 IPR005269 GO:0009691|GO:0016787
Gma12g01649 220 Gene3D - 25 217 - -
Gma12g01649 220 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE 49 220 - -
Gma12g01649 220 PANTHER LOG FAMILY PROTEIN YJL055W 49 220 - -
Gma12g01649 220 Pfam Possible lysine decarboxylase 68 198 IPR031100 -
Gma12g01649 220 SUPERFAMILY MCP/YpsA-like 50 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01649 Gma-Chr12 36653192 36659248 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01649 K22522 - gmx:100780273 334.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02892 13 43495786 43501086 Gma12g01649 12 36653192 36659248 GST
Gma12g01649 12 36653192 36659248 Gma12g00680 12 5973645 5979702 PCT
Gma12g01649 12 36653192 36659248 Gma11g01630 11 17632084 17638221 PCT
Gma12g00680 12 5973645 5979702 Gma12g01649 12 36653192 36659248 PCT
Gma11g01630 11 17632084 17638221 Gma12g01649 12 36653192 36659248 PCT