Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00680 ATGATAGAGAAGAAGACACAGTGTGAGAAAAAGGAAAAAATGGAAGGTGAAGAAACTGAGATGAAACAACAATCCAGGTTCAAAAGGATTTGTGTGTTCTGTGGCAGCAGCCCTGGGAACAAGAGTAGCTATAAGGACGCTGCTATTGAGCTTGGGAAAGAGTTGGTGTCAAGAAATATTGATCTGGTTTATGGAGGAGGAAGCATTGGTTTGATGGGGTTGGTTTCCCAGGCTGTTTATGAAGGAGGTCGCCATGTAATTGGAGTTATTCCCAAGACACTGATGCCAAGAGAGATTACTGGAGAGACAGTGGGGGAAGTGATGGCAGTAGCAGACATGCATCAAAGAAAAGCAGAGATGGCTAAGCACTCTGATGCCTTTATTGCCTTGCCCGGTGGCTATGGGACTCTTGAGGAGCTTCTAGAGGTGATAACTTGGGCTCAGCTTGGCATCCATGATAAACCGGTGGGGTTGCTGAATGTAGATGGATACTACAATTCCTTGTTGTGTTTCATTGACAAAGCTGTGGAAGAAGGCTTCATTAGCCCCAAAGCTCGCCACATAATTGTATCTGCCCCATCAACAAAAGAGCTTGTCAAAAAGATGGAGGAATATTTTCCACAACATGAAAGAGTTGCCTCTAAGCTAAGCTGGGAAACTGAGCAGATAGATTACTCCTCAAATTGTGGCATGTCTAGGTGA 702 0.4459 MIEKKTQCEKKEKMEGEETEMKQQSRFKRICVFCGSSPGNKSSYKDAAIELGKELVSRNIDLVYGGGSIGLMGLVSQAVYEGGRHVIGVIPKTLMPREITGETVGEVMAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLCFIDKAVEEGFISPKARHIIVSAPSTKELVKKMEEYFPQHERVASKLSWETEQIDYSSNCGMSR 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00680 233 Gene3D - 16 204 - -
Gma12g00680 233 PANTHER LOG FAMILY PROTEIN YJL055W 18 233 - -
Gma12g00680 233 MobiDBLite consensus disorder prediction 1 21 - -
Gma12g00680 233 SUPERFAMILY MCP/YpsA-like 26 205 - -
Gma12g00680 233 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE LOG1 18 233 - -
Gma12g00680 233 TIGRFAM TIGR00730: TIGR00730 family protein 28 205 IPR005269 GO:0009691|GO:0016787
Gma12g00680 233 Pfam Possible lysine decarboxylase 72 202 IPR031100 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00680 Gma-Chr12 5973645 5979702 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00680 K22522 - gmx:100815735 457.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00680 12 5973645 5979702 Gma12g00680 12 5973645 5979702 ECH
Gma11g01630 11 17632084 17638221 Gma12g00680 12 5973645 5979702 ECH
Gma12g00680 12 5973645 5979702 Gma11g01630 11 17632084 17638221 GST
Gma13g02892 13 43495786 43501086 Gma12g00680 12 5973645 5979702 PCT
Gma12g01649 12 36653192 36659248 Gma12g00680 12 5973645 5979702 PCT
Gma12g00680 12 5973645 5979702 Gma13g02892 13 43495786 43501086 PCT
Gma12g00680 12 5973645 5979702 Gma12g01649 12 36653192 36659248 PCT