Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02870 ATGGCATCATTGTCAAGGTTCCTCAAAGTGTCTCTGTCTTTTATGTTGCTCTTCCTCATCTCCATTTCACCTTCTTTCTCCTCTCCAACTGATCACCCCACAAGCAATGACCTTCGTTTTTCTTCAACAGCAGAAAAACTCATAAGAGGGCTTAACCTGTTCCCGAAAGACCCCATTAACACACTCAAGAAAAATGACCCTCTTTTTGTGTCAGGAAGCATTGTGGAGAAGAGGTTCACTTTCCCTACTCTTGCTGCTTCTTCAGAATCATCTATAGAAGAACTTGGTCACCATGCAGGCTATTATCGCCTTCCTCGTTCCAAAGCTGCAAGGATGTTCTACTTTTTCTTTGAATCTCGAAGCAGTAAGAATGATCCTGTTGTCATATGGCTGACTGGAGGACCAGGATGCAGCAGTGAACTAGCTTTGTTTTACGAAAATGGTCCTTTTCAGCTTACCAAGAACTTGTCTCTTGTGTGGAATGACTATGGCTGGGACAAGGCATCAAATATTATATTTGTAGACCAACCCACTGGGACGGGGTTCAGCTATACTTCTGATGAGAGTGACATTCGCCATGATGAAGAGGGCGTTAGCAATGATTTGTATGACTTCTTGCAGGCATTTTTCAAGGAGCACCCTCAATTCACTAAGAATGACTTTTATATTACTGGAGAGTCATATGCTGGACATTACATTCCAGCTCTTGCATCCAGGGTTCACCAAGGAAACAAAGCAAAAGAAGGAATTCATATAAATCTAAAGGGATTTGCTATTGGTAATGGGTTAACCAATCCTGAAATTCAGTACCAGGCGTATACAGACTACGCATTAGACAGGGGACTAATTAAAAAGGCTGAATATAACAGTATCAACAAGTTGATCCCACCATGCAAGCAGGCCATAGAAGCTTGCGGAACTGAAGGTGGAGAAACATGCGTATCTTCATTATATGTTTGCAATAAGATATTCAATCGGATCATGACCATTGCTGATGATGTTAATTACTATGACATTAGAAAGAAATGTGTGGGAGTTCTGTGTTATGACTTCTCTGTGATGGAGGATTTCTTAAACGAGAAGACAGTGAGAGATGCTTTAGGTGTTGGGGACTTGGACTTCGTTTCATGCAGTAGCACAGTGTATAGTGCTATGATGCAAGACTGGATGAGAAATCTGGAAGTTGGTATTCCCACACTTCTTGAGGAAGGAATCAAGGTGCTTGTGTATGCTGGAGAAGAAGATCTCATATGCAATTGGCTTGGGAATTCAAGGTGGGTTCAAGCAATGGAGTGGTCTGGTCAAAAACAATTTGGGGCGTCTGGTACAGTCCCATTTTTGGTTGATGGTGCTGAAGCAGGAACGCTGAAAAGCCATGGACCTCTCGCTTTCCTCAAGGTATACGAGGCTGGTCACATGGTCCCTATGGATCAACCAAAAGCTGCACTTGAGATGCTAAGAAGCTGGATGCAAGGCAAACTGACAATGACAAAGAGTGGAGATAATGTCTCTCCTAAATGA 1521 0.426 MASLSRFLKVSLSFMLLFLISISPSFSSPTDHPTSNDLRFSSTAEKLIRGLNLFPKDPINTLKKNDPLFVSGSIVEKRFTFPTLAASSESSIEELGHHAGYYRLPRSKAARMFYFFFESRSSKNDPVVIWLTGGPGCSSELALFYENGPFQLTKNLSLVWNDYGWDKASNIIFVDQPTGTGFSYTSDESDIRHDEEGVSNDLYDFLQAFFKEHPQFTKNDFYITGESYAGHYIPALASRVHQGNKAKEGIHINLKGFAIGNGLTNPEIQYQAYTDYALDRGLIKKAEYNSINKLIPPCKQAIEACGTEGGETCVSSLYVCNKIFNRIMTIADDVNYYDIRKKCVGVLCYDFSVMEDFLNEKTVRDALGVGDLDFVSCSSTVYSAMMQDWMRNLEVGIPTLLEEGIKVLVYAGEEDLICNWLGNSRWVQAMEWSGQKQFGASGTVPFLVDGAEAGTLKSHGPLAFLKVYEAGHMVPMDQPKAALEMLRSWMQGKLTMTKSGDNVSPK 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02870 506 Pfam Serine carboxypeptidase 95 492 IPR001563 GO:0004185|GO:0006508
Gma13g02870 506 PANTHER CARBOXYPEPTIDASE 40 491 - -
Gma13g02870 506 Gene3D alpha/beta hydrolase 77 504 IPR029058 -
Gma13g02870 506 SUPERFAMILY alpha/beta-Hydrolases 97 493 IPR029058 -
Gma13g02870 506 PRINTS Carboxypeptidase C serine protease (S10) family signature 161 173 IPR001563 GO:0004185|GO:0006508
Gma13g02870 506 PRINTS Carboxypeptidase C serine protease (S10) family signature 174 184 IPR001563 GO:0004185|GO:0006508
Gma13g02870 506 PRINTS Carboxypeptidase C serine protease (S10) family signature 209 234 IPR001563 GO:0004185|GO:0006508
Gma13g02870 506 PRINTS Carboxypeptidase C serine protease (S10) family signature 462 475 IPR001563 GO:0004185|GO:0006508
Gma13g02870 506 ProSitePatterns Serine carboxypeptidases, serine active site. 223 230 IPR018202 GO:0004185
Gma13g02870 506 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 40 491 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02870 Gma-Chr13 43227223 43230519 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02870 K16298 - gmx:100797295 1010.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02870 13 43227223 43230519 Gma13g02870 13 43227223 43230519 ECH
Gma13g02870 13 43227223 43230519 Gma12g01677 12 37132696 37136037 GST
Gma13g02870 13 43227223 43230519 Gma11g01593 11 17130085 17134508 PCT
Gma12g00713 12 6356898 6370032 Gma13g02870 13 43227223 43230519 PCT
Gma11g01592 11 17123744 17128573 Gma13g02870 13 43227223 43230519 PCT