Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01677 ATGGCATCATCGTCAAGGTTCCTCAAAATGTCTCTGTCTTTTGTGTTGCTCTTCCTCATCTCAATTCCACCTTCTTTCTCCTCTCCAATTCACCCCACAAGCAACGACCTTCGTTTTTCTTCAACAGCAGAAAAACTCATAAGAGGGCTTAACCTGTTCCCGAAAGACCCCATTAACACACTCGAGAATGACCCTCTTTTTGTGTCAGGAAGCATTGTGGAGAAGAGCTTCACTTTCCCTAGTCTTGCTGCTTCTTCAGAATCTTCTGTTGAAGAACTTGGTCACCATGCAGGCTATTATCGCCTTCCTCGTTCCAAAGCTGCAAGGATGTTCTACTTCTTCTTTGAATCTCGAAGCAGTAAGAATGATCCTGTTGTCATATGGCTGACTGGAGGACCAGGATGCAGCAGTGAACTAGCTTTGTTTTACGAAAATGGTCCTTTTCAGCTTACCAAGAACTTGTCTCTTGTGTGGAATGACTATGGCTGGGACAAGGCATCAAATATTATATTTGTAGACCAACCCACTGGGACGGGTTTCAGCTATACTTCTGATGAGAGTGACATTCGCCATGATGAAGAGGGTGTTAGCAATGATTTGTATGACTTCTTGCAGGCATTTTTCAAGGAGCACCCTCAGCTCACTAAGAATGACTTTTATATTACTGGAGAGTCATATGCTGGACACTACATTCCAGCTCTTGCATCCAGGGTTCACCAAGGAAACAAAGCAAAAGAAGGAATTCATATAAATCTAAAGGGTTTTGCTATTGGCAATGGGTTAACCAATCCTGAAATTCAGTACCAGGCATATACAGATTACGCATTAGACAGGGGACTAATTAAAAAGGCTGATTATGACAGCATCAACAAGTTGATCCCACCATGCAAGCAGGCCATAGAAGCTTGCGGCACTGAAGGTGGAGAAACATGCGTATCTTCATTATATGTTTGCAATAAGATATTCAATCGGATCATGACCATCGCTGACGATGTAAATTACTATGACATTAGAAAGAAATGTGTGGGAGATCTGTGTTATGACTTCTCTGTGATGGAGGATTTCTTAAACAAGAAGACAGTGAGAGATGCTTTAGGTGTTGGGGACTTGGACTTCGTTTCATGCAGTAGCACAGTGTATAGTGCTATGATGCAAGACTGGATGAGAAATCTGGAAGTTGGTATTCCCACACTCCTTGAGGAAGGAATCAAGGTGCTTGTGTATGCTGGAGAAGAAGATCTCATATGCAACTGGCTCGGGAATTCAAGGTGGGTTAATGCAATGGAGTGGTCTGGTCAAAAACAATTTGGGGCGTCTGGTACAGTCCCATTTTTAGTTGATGGTGCAGAAGCAGGAACGCTGAAAAGCCATGGACCTCTCTCTTTCCTCAAGGTATACGAGGCTGGTCACATGGTCCCTATGGATCAACCAAAAGCTGCACTTGAGATGCTAAGAAGCTGGATGCAAGGGAAACTGACAATGACAAAGAGTGGAGATAATGTCTCTCCTAAATGA 1515 0.4323 MASSSRFLKMSLSFVLLFLISIPPSFSSPIHPTSNDLRFSSTAEKLIRGLNLFPKDPINTLENDPLFVSGSIVEKSFTFPSLAASSESSVEELGHHAGYYRLPRSKAARMFYFFFESRSSKNDPVVIWLTGGPGCSSELALFYENGPFQLTKNLSLVWNDYGWDKASNIIFVDQPTGTGFSYTSDESDIRHDEEGVSNDLYDFLQAFFKEHPQLTKNDFYITGESYAGHYIPALASRVHQGNKAKEGIHINLKGFAIGNGLTNPEIQYQAYTDYALDRGLIKKADYDSINKLIPPCKQAIEACGTEGGETCVSSLYVCNKIFNRIMTIADDVNYYDIRKKCVGDLCYDFSVMEDFLNKKTVRDALGVGDLDFVSCSSTVYSAMMQDWMRNLEVGIPTLLEEGIKVLVYAGEEDLICNWLGNSRWVNAMEWSGQKQFGASGTVPFLVDGAEAGTLKSHGPLSFLKVYEAGHMVPMDQPKAALEMLRSWMQGKLTMTKSGDNVSPK 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01677 504 ProSitePatterns Serine carboxypeptidases, serine active site. 221 228 IPR018202 GO:0004185
Gma12g01677 504 Pfam Serine carboxypeptidase 93 490 IPR001563 GO:0004185|GO:0006508
Gma12g01677 504 PANTHER CARBOXYPEPTIDASE 39 489 - -
Gma12g01677 504 PRINTS Carboxypeptidase C serine protease (S10) family signature 159 171 IPR001563 GO:0004185|GO:0006508
Gma12g01677 504 PRINTS Carboxypeptidase C serine protease (S10) family signature 172 182 IPR001563 GO:0004185|GO:0006508
Gma12g01677 504 PRINTS Carboxypeptidase C serine protease (S10) family signature 207 232 IPR001563 GO:0004185|GO:0006508
Gma12g01677 504 PRINTS Carboxypeptidase C serine protease (S10) family signature 460 473 IPR001563 GO:0004185|GO:0006508
Gma12g01677 504 Gene3D alpha/beta hydrolase 75 502 IPR029058 -
Gma12g01677 504 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 39 489 IPR001563 GO:0004185|GO:0006508
Gma12g01677 504 SUPERFAMILY alpha/beta-Hydrolases 95 491 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01677 Gma-Chr12 37132696 37136037 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01677 K16298 - gmx:100785987 998.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01677 12 37132696 37136037 Gma12g01677 12 37132696 37136037 ECH
Gma13g02870 13 43227223 43230519 Gma12g01677 12 37132696 37136037 GST
Gma12g01677 12 37132696 37136037 Gma11g01593 11 17130085 17134508 PCT
Gma12g00713 12 6356898 6370032 Gma12g01677 12 37132696 37136037 PCT
Gma11g01592 11 17123744 17128573 Gma12g01677 12 37132696 37136037 PCT